Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq3 129 7e-25 seq61 107 2e-18 >seq3 Length=4565964 Score = 129 bits (142), Expect = 7e-25 Identities = 203/291 (70%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 33574 TAAGTATCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAAT 33633 || || ||||| | | || ||||| || || || ||||| || ||||| ||||| || Sbjct 1995579 TAGGTGTCGATAAGCAAGCTGTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGGAAG 1995638 Query 33634 CCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTT 33693 || ||||| || | ||||||| | ||| || || | || || ||| |||| || Sbjct 1995639 CCATAGAAGCAGCGGGCCTCGGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAGTTC 1995698 Query 33694 TCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTT 33753 ||||| || || ||||||||||| ||||| || |||| ||||| || || | ||| Sbjct 1995699 TCATTGACGATGCCGTCACTGGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGTTTC 1995758 Query 33754 TCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACT 33813 || || | || | | ||| || | ||| || || | ||| || || || ||| Sbjct 1995759 TCCTCCTTCTTGAGCATTTCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTCTACT 1995818 Query 33814 GTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATAT 33864 ||||| || || ||||| |||||||| ||||| | ||||||||| ||| || Sbjct 1995819 GTCCAGAAAGACGCCTCGGCCTTTTTGTACATCTCCCAGATGTCCTAAAAT 1995869 >seq61 Length=1822817 Score = 107 bits (118), Expect = 2e-18 Identities = 114/147 (78%), Gaps = 5/147 (3%) Strand=Plus/Minus Query 33381 CTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGC 33440 |||||| | ||||||||| | ||| || |||||||| |||||||| ||||| |||||||| Sbjct 748186 CTTTTTCAACCAAAATATTGCAGCAAACGATCCAGAGAAGAAGATGCCTTCCACTGCAGC 748127 Query 33441 AAAGGCAATAAGTCTCTCTCCATA---ACCGGCGCTGTCATGTATCCA-CTTTTGAGCCC 33496 ||| ||||| || ||||||||| | | | | || |||| ||||| | | || |||| Sbjct 748126 AAATGCAATGAGCCTCTCTCCAAATGTAGCTTCCTTGGCATGGATCCATCGTATG-GCCC 748068 Query 33497 AATCGGCCTTCTTTTTTACACAAGGCA 33523 | || || ||||| || ||||| |||| Sbjct 748067 AGTCTGCTTTCTTCTTGACACATGGCA 748041 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 33616 TCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGTACAA 33675 || || ||||| || || || ||||||||||| || || | |||||| |||||| || | Sbjct 745892 TCCATTGCCATTTGGAAGCCATAGAAACATCTTGCTTCAGGAATCTGAACTTCTTGACCA 745833 Query 33676 AATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACA 33735 || | || | | ||| ||||| || || |||||||| |||||||| || |||| | Sbjct 745832 AACCTCTCTACTAGATTCTCATTGACGATGCCGTCACTTGCTGCAAAGAATGCCAGGATG 745773 Query 33736 TGTTTTATAAAATATTTTTC 33755 || || || |||| || ||| Sbjct 745772 TGCTTGATGAAATGTTGTTC 745753 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622933456227400