Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq176 96.9 3e-15 seq31 89.7 5e-13 >seq176 Length=618158 Score = 96.9 bits (106), Expect = 3e-15 Identities = 128/178 (72%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || |||| | |||||| | || | ||| |||||||| || |||||||| || | Sbjct 484187 CCGCCCCGCAGCCTCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 484128 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| || |||| | ||||||||||| || || Sbjct 484127 AGGGTGCGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCGGGCGGA 484068 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 || ||||| ||||| ||| || ||| | | ||| | ||| ||| ||| |||| Sbjct 484067 ATGCCTTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATAGTGTCGCTGGGTTCGA 484010 >seq31 Length=3510018 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 145669 GTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATT 145728 ||||| || |||||| | ||||| || || || |||||||| ||||| || ||||| || Sbjct 1270724 GTATTCTATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTT 1270665 Query 145729 ACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCC 145780 ||| || | ||| || || || ||||| ||||||||||| ||||||||| Sbjct 1270664 ACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCC 1270613 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 145669 GTATTGTACGATCTCGGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATT 145728 ||||| | |||||| | ||||| || || || |||||||| ||||| || ||||| || Sbjct 1271401 GTATTCGATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTT 1271342 Query 145729 ACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCC 145780 ||| || | ||| || || || ||||| ||||||||||| ||||||||| Sbjct 1271341 ACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCC 1271290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472002386217600