Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq3 114 2e-20 seq31 93.3 5e-14 >seq3 Length=4565964 Score = 114 bits (126), Expect = 2e-20 Identities = 185/266 (70%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 || ||||| || || || ||||| || ||||| || || || || |||||||| | ||| Sbjct 1995597 CTGTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGGAAGCCATAGAAGCAGCGGGCC 1995656 Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068 |||| | ||| || || | || || || | || || ||||| || || |||||| Sbjct 1995657 TCGGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAGTTCTCATTGACGATGCCGTCA 1995716 Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 33128 ||||| ||||| || |||| ||||| || || | ||| || || | || | Sbjct 1995717 CTGGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGTTTCTCCTCCTTCTTGAGCATT 1995776 Query 33129 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 33188 | ||| || | ||| || || | ||| || || || |||||||| || || ||||| Sbjct 1995777 TCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTCTACTGTCCAGAAAGACGCCTCG 1995836 Query 33189 GCCTTTTTATACATATTCCAGATGTC 33214 |||||||| ||||| | ||||||||| Sbjct 1995837 GCCTTTTTGTACATCTCCCAGATGTC 1995862 >seq31 Length=3510018 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 62851 |||| ||| ||||| ||||| || ||||| ||||||||||| || | || || || ||| Sbjct 1270723 TATTCTATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTTA 1270664 Query 62852 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 62911 ||||| |||||| ||||| || || || ||| | || |||||||| || | |||| Sbjct 1270663 CTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGCC 1270604 Query 62912 TCTATAATCGCTTTCCAGA 62930 | ||| || || | ||||| Sbjct 1270603 TGTATGATGGCCTGCCAGA 1270585 Score = 93.3 bits (102), Expect = 5e-14 Identities = 104/139 (75%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 62851 |||| || ||||| ||||| || ||||| ||||||||||| || | || || || ||| Sbjct 1271400 TATTCGATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTTA 1271341 Query 62852 CTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGAT 62911 ||||| |||||| ||||| || || || ||| | || |||||||| || | |||| Sbjct 1271340 CTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGCC 1271281 Query 62912 TCTATAATCGCTTTCCAGA 62930 | |||||| || | ||||| Sbjct 1271280 TGTATAATGGCCTGCCAGA 1271262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633618020494000