Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq82 89.7 4e-13 seq176 87.8 2e-12 >seq82 Length=1221020 Score = 89.7 bits (98), Expect = 4e-13 Identities = 107/143 (75%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 51090 ACCCACATAATTGTTAGGATCGCGACCATCCACGCTGTAATGATCGTTTAGAAATATGGC 51149 ||||||||| ||| ||||| || ||||||| |||||| | || || ||| | ||||| Sbjct 693072 ACCCACATATCCGTTGGGATCTCGGCCATCCAGGCTGTATTTGTCATTGAGATAGATGGC 693131 Query 51150 ATAACCCAATGCCATG-TCTGCACTAGGCGTCCATTCCATAATTTTCTTGGCCCAGTACA 51208 || | | | ||| |||| || |||||||||| ||| |||||||||||||||| Sbjct 693132 -TATCTCCAGAGCATCCTCTGGGGACGGAGTCCATTCCAAAATCTTCTTGGCCCAGTACA 693190 Query 51209 TGCGCATGTAACCGTGCATCTTG 51231 | | || | | |||||||||||| Sbjct 693191 TCCTCAAGAAGCCGTGCATCTTG 693213 >seq176 Length=618158 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 |||||||||||| | ||| || ||| ||||| ||||| ||||| || ||||| Sbjct 484021 GACACTATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCGCCCGACCAG 484080 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 |||||| | || ||||||||||| || | || || | |||||| || || ||||| Sbjct 484081 CAGCGGCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGCACCCTGTCTGACTACAAC 484140 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCT 25216 || || || || ||||| || || | ||||| ||||| Sbjct 484141 ATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGAGGCT 484178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433318678708475