Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq117 96.9 7e-15 seq90 96.9 7e-15 seq50 96.9 7e-15 seq52 95.1 2e-14 seq32 95.1 2e-14 seq24 87.8 4e-12 seq156 84.2 4e-11 >seq117 Length=957042 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||||||||| ||||||||||||||| Sbjct 621312 AGCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAG 621371 Query 142563 CCCCACATCGGGC 142575 ||||||||||||| Sbjct 621372 CCCCACATCGGGC 621384 >seq90 Length=1136573 Score = 96.9 bits (106), Expect = 7e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 142500 GATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTC 142559 || |||||||||||||||||||||||||| ||||||||||| |||||||||||| Sbjct 242971 GAAAGCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTC 243030 Query 142560 GAGCCCCACATCGGGC 142575 |||||||||||||||| Sbjct 243031 GAGCCCCACATCGGGC 243046 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/74 (91%), Gaps = 2/74 (3%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAA-TCTAGTGGTCGTGGGTTCGA 142561 |||||||||||||||||||||||||| ||||||||| || || |||||||||||||| Sbjct 241605 AGCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATTCCAG-GGTCGTGGGTTCGA 241663 Query 142562 GCCCCACATCGGGC 142575 |||||||||||||| Sbjct 241664 GCCCCACATCGGGC 241677 >seq50 Length=3751176 Score = 96.9 bits (106), Expect = 7e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1384877 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 1384936 Query 142564 CCCACATCGGGCA 142576 ||||||||||||| Sbjct 1384937 CCCACATCGGGCA 1384949 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1385190 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 1385249 Query 142564 CCCACATCGGGC 142575 |||||||||||| Sbjct 1385250 CCCACATCGGGC 1385261 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 1388792 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 1388851 Query 142564 CCCACATCGGGC 142575 |||||||||||| Sbjct 1388852 CCCACATCGGGC 1388863 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||| Sbjct 1385036 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCAAGC 1385095 Query 142564 CCCACATCGGGC 142575 |||||||||||| Sbjct 1385096 CCCACATCGGGC 1385107 >seq52 Length=2510654 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 697602 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 697661 Query 142564 CCCACATCGGGC 142575 |||||||||||| Sbjct 697662 CCCACATCGGGC 697673 >seq32 Length=1878114 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct 565943 GCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 565884 Query 142564 CCCACATCGGGC 142575 |||||||||||| Sbjct 565883 CCCACATCGGGC 565872 >seq24 Length=2144785 Score = 87.8 bits (96), Expect = 4e-12 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 142508 GGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCA 142567 ||||||||||||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1628350 GGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAAGGTCGTGGGTTCGAGCCCCA 1628409 Query 142568 CATCGGGC 142575 |||||||| Sbjct 1628410 CATCGGGC 1628417 >seq156 Length=710379 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 |||||||||||||||||||||||||| ||||| ||||||| ||||| ||||||||| Sbjct 572990 AGCCCGGTTAGCTCAGTCGGTAGAGCATCAGACTTTTAATCTGAGGGTCGCGGGTTCGAG 573049 Query 142563 CCCCACATCGGGCAGA 142578 ||| || ||||| || Sbjct 573050 TCCCTCACCGGGCGGA 573065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027813556434365