Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq176 118 2e-21 seq96 98.7 2e-15 seq50 84.2 4e-11 >seq176 Length=618158 Score = 118 bits (130), Expect = 2e-21 Identities = 130/172 (76%), Gaps = 1/172 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || | || |||| ||| || |||||||| || |||||||| || || || Sbjct 484187 CCGCCCCGCAGCCTCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 484128 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || || || | |||||| ||||| || || || | || |||||||| ||| Sbjct 484127 AGGGTGCGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCGGGCGGA 484068 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 |||||||||||||| || ||||| ||||| || |||||| ||||| |||| Sbjct 484067 ATGCCTTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATAGTGTC-GCTG 484017 >seq96 Length=2115401 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || ||||||||||| ||||| |||||||| ||| |||||||| | | |||||| ||| Sbjct 628029 CCCTCCTTGTCTTGTATCTTGGCCTTGACATTCTCAATGGTGTCGGAAGGTTCTACCTCC 627970 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || ||||| || ||||| |||||||| || || |||||||| Sbjct 627969 AACGTAATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCAT 627926 >seq50 Length=3751176 Score = 84.2 bits (92), Expect = 4e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | ||||||| | ||||||||||||||| Sbjct 1384876 CGCCCGGTTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAG 1384935 Query 84515 CCCCACATCGGGCA 84528 |||||||||||||| Sbjct 1384936 CCCCACATCGGGCA 1384949 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921602066705800