Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq31 100 3e-16 seq3 98.7 1e-15 >seq31 Length=3510018 Score = 100 bits (110), Expect = 3e-16 Identities = 78/93 (84%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000 |||||| || | ||||| ||||||| | |||||||||| |||||||| ||||| ||||| Sbjct 1277713 ATAGATGTTACTGGTGTAGGGCTCAATGGACTCATTGTTGCCCAAGATCTGGGCAGTGGA 1277654 Query 114001 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 ||| ||||||||||| || || || |||||||| Sbjct 1277653 GGCCGTGGGCATGGGGGCAATCAGCAGGCTGTT 1277621 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573 ||| ||||| || ||||| |||| || | ||| |||||||||| ||||| || || Sbjct 1270724 GTATTCTATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTT 1270665 Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633 ||| |||||| ||||| ||||| |||||||| || || || ||||||||||| | Sbjct 1270664 ACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGC 1270605 Query 114634 CTTGAGAATAGCCTTCCAGA 114653 || | || |||| ||||| Sbjct 1270604 CTGTATGATGGCCTGCCAGA 1270585 Score = 86.0 bits (94), Expect = 7e-12 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 114514 GTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATT 114573 ||| || || || ||||| |||| || | ||| |||||||||| ||||| || || Sbjct 1271401 GTATTCGATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTT 1271342 Query 114574 TGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGA 114633 ||| |||||| ||||| ||||| |||||||| || || || ||||||||||| | Sbjct 1271341 ACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGC 1271282 Query 114634 CTTGAGAATAGCCTTCCAGA 114653 || | ||| |||| ||||| Sbjct 1271281 CTGTATAATGGCCTGCCAGA 1271262 >seq3 Length=4565964 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| ||| ||| || || || || ||| ||| || |||| | |||| ||||| Sbjct 1994781 CCTCGTCGCGGCTGATCAGCTCGTTAGAAAAGGTCAGGCCATGCATTAATCCCCTCTTCT 1994840 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 |||||||||| || | | |||||||||||||||||| || |||||||| ||||| | Sbjct 1994841 TCAACCAGAAGATGGAAGCAAATGAACCCGAGAAGAAAATGCCCTCCACGGCAGCGAAGG 1994900 Query 126186 CAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCAAACCACTTCATCGCCCACTGCG 126245 | | || | ||| || ||| | ||| | | || | ||| |||| ||||| | | Sbjct 1994901 CCACGACCCTCTCCCCATAGGTGGTCGAGTCCGAGTTGATCCAGTTCAGAGCCCAATCTG 1994960 Query 126246 CCTTTTTCTCGATACACGGGACGGTCT 126272 |||| |||| | ||| || | |||| Sbjct 1994961 CCTTCTTCTTAACACAAGGCAGAGTCT 1994987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597340420886200