Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq107 93.3 5e-14 seq19 89.7 6e-13 seq18 87.8 2e-12 seq176 86.0 7e-12 seq46 86.0 7e-12 >seq107 Length=1005640 Score = 93.3 bits (102), Expect = 5e-14 Identities = 71/84 (85%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||| | |||| |||| | |||||||||| ||||||| | ||||||| | || |||| Sbjct 120941 AAAAATGTCCTCCCCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATAC 120882 Query 57058 TCACCACTATACTACCGAGGATTG 57081 | |||||||||||||||||||||| Sbjct 120881 TAACCACTATACTACCGAGGATTG 120858 >seq19 Length=2857068 Score = 89.7 bits (98), Expect = 6e-13 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 |||||||||| | |||||||||| ||||||| | ||||||| | || ||||| |||||| Sbjct 651938 TCTCCTCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATACTAACCACT 651997 Query 57066 ATACTACCGAGGATTGA 57082 ||||||||||||| ||| Sbjct 651998 ATACTACCGAGGACTGA 652014 Score = 87.8 bits (96), Expect = 2e-12 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 |||||| ||||| |||| | |||||||||| || |||| | ||||||| | || |||| Sbjct 833808 AAAAATGGTCTCCCCGGCGGGGAATCGAACCCCGGACTCCTGAGTGACAGTCAGAGATAC 833749 Query 57058 TCACCACTATACTACCGAGGATT 57080 | ||||||||||||||||||||| Sbjct 833748 TAACCACTATACTACCGAGGATT 833726 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| |||| | |||||||||| ||||||| | ||||||| | || ||||| |||||| Sbjct 652106 TCTCCCCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATACTAACCACT 652165 Query 57066 ATACTACCGAGGATTGA 57082 ||||||||||||| ||| Sbjct 652166 ATACTACCGAGGACTGA 652182 >seq18 Length=2396980 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/76 (86%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||| | ||||||| | || ||||| ||||||| Sbjct 524100 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATACTAACCACTA 524041 Query 57067 TACTACCGAGGATTGA 57082 |||||||||||||||| Sbjct 524040 TACTACCGAGGATTGA 524025 >seq176 Length=618158 Score = 86.0 bits (94), Expect = 7e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 57000 AAAT-TTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACT 57058 |||| ||||||| | || | |||||||||| ||||||| | || |||| |||| ||||| Sbjct 606609 AAATCTTTCTCCCCCGCGGGGAATCGAACCCCGGTCTCCTGAGTTACAGTCGGAAATACT 606550 Query 57059 CACCACTATACTACCGAGGATTGA 57082 ||||||||||||||||||| ||| Sbjct 606549 AACCACTATACTACCGAGGACTGA 606526 Score = 84.2 bits (92), Expect = 2e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 41996 CAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTC 42055 || ||||| |||| ||| |||||| || || ||||| |||| ||| || || |||| Sbjct 484173 CAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCGTC 484114 Query 42056 ATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTC 42115 || |||||||| || || || || || ||||||||||||| || | || |||||||| Sbjct 484113 CTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCGGGCGGAATGCCTTCCTTGTC 484054 Query 42116 CATGATTTT 42124 | ||| || Sbjct 484053 CTGGATCTT 484045 >seq46 Length=1707116 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| |||| | |||||||||| ||||||| | ||||||| | || ||||| ||||||| Sbjct 139422 CTCCCCGGCGGGGAATCGAACCCCGGTCTCCTGAGTGACAGTCAGAGATACTAACCACTA 139363 Query 57067 TACTACCGAGGATTG 57081 ||||||||||||||| Sbjct 139362 TACTACCGAGGATTG 139348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543200815367600