Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq31 102 8e-17 >seq31 Length=3510018 Score = 102 bits (112), Expect = 8e-17 Identities = 141/195 (72%), Gaps = 2/195 (1%) Strand=Plus/Plus Query 94180 TTCGCGGTCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGA-AA 94238 || || || || || |||||||||||||| ||| | | |||| | || |||| | || Sbjct 1269860 TTTGCCGTGTACCTGGAGCCCTGGCACGCCGACATCTTCGATTTCCTGGA-CTGCAAGAA 1269918 Query 94239 GAACCACGGCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGA 94298 |||||||||||| || | || ||||| | |||||||||||||| || ||| | ||||| Sbjct 1269919 GAACCACGGCAAGGAAGAGCAGCGGGCCCGTGACCTCTTCTACGCCCTGTGGATACCAGA 1269978 Query 94299 CCTTTTTATGAAACGCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATG 94358 ||| || |||| ||| | ||||| || | |||| | || | || ||||| || | Sbjct 1269979 CCTGTTCATGAGGCGCATTGAGAACGACCAGGACTGGTGCCTGATGTGCCCCAACGAGAG 1270038 Query 94359 TCCCGGACTGTCCGA 94373 || || ||||||| Sbjct 1270039 CCCAGGGTTGTCCGA 1270053 Score = 96.9 bits (106), Expect = 3e-15 Identities = 148/211 (70%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 94999 ATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAGCTCTA 95058 || || |||| ||| | ||||| || | || ||| ||| || |||||| ||| || Sbjct 1277531 ATCTTGCAGTATGACATGTGGGGCGTCACCCCAACGGACCTGCACAACTGGGCAGCCCTG 1277590 Query 95059 CGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACG 95118 |||||| | | | | || ||| ||| ||||| | ||||||||||||||| Sbjct 1277591 AAGGCTGATATCGCCCAGTATGGCCTGAGGAACAGCCTGCTGATTGCCCCCATGCCCACG 1277650 Query 95119 GCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTG 95178 |||||||| || |||||| | |||||||| ||||| | || |||| |||| ||| | Sbjct 1277651 GCCTCCACTGCCCAGATCTTGGGCAACAATGAGTCCATTGAGCCCTACACCAGTAACATC 1277710 Query 95179 TACAACAGGCGGGTGCTCGCCGGGGAATTCC 95209 || | | | |||||||| | || ||||||| Sbjct 1277711 TATACCCGCAGGGTGCTCTCGGGAGAATTCC 1277741 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494712285169400