Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 2e-15 seq31 91.5 2e-13 >seq3 Length=4565964 Score = 98.7 bits (108), Expect = 2e-15 Identities = 181/265 (68%), Gaps = 3/265 (1%) Strand=Plus/Plus Query 160216 GTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATGTCGCCTC 160275 |||||| |||| ||| | || |||||||| ||||| ||| ||||| | ||||| Sbjct 1995599 GTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGGAAGCCATAGAAGCAGCGGGCCTC 1995658 Query 160276 CAGATACTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAACCCGTCGGC 160335 | |||||||||||| |||| | | ||| || |||| || | ||||| Sbjct 1995659 GGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAGTTCTCATTGACGATGCCGTCACT 1995718 Query 160336 GGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTGAGTCTCTT 160395 ||| |||||||| |||| || || |||||||| ||| |||| || || ||||| | | Sbjct 1995719 GGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGTTTCTCCTCCTTCTTGAG---CAT 1995775 Query 160396 TTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCAATTGGCAGCCTG 160455 |||||||| | | || | || | ||||||||| || | |||| | |||| Sbjct 1995776 TTCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTCTACTGTCCAGAAAGACGCCTC 1995835 Query 160456 AGCAGTTTTGTACATGGCCCAGATG 160480 || |||||||||| |||||||| Sbjct 1995836 GGCCTTTTTGTACATCTCCCAGATG 1995860 >seq31 Length=3510018 Score = 91.5 bits (100), Expect = 2e-13 Identities = 150/214 (70%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || ||||| || ||||||| ||||| | | ||| ||||| | || || | | Sbjct 1277743 CTGGAATTCTCCCGAGAGCACCCTGCGGGTATAGATGTTACTGGTGTAGGGCTCAATGGA 1277684 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 ||| |||||||| || ||||| || ||| ||||||||||||||| || | |||||| Sbjct 1277683 CTCATTGTTGCCCAAGATCTGGGCAGTGGAGGCCGTGGGCATGGGGGCAATCAGCAGGCT 1277624 Query 204316 GTTGCGCACACCGTATTTTTGGA-CCCTGCGCTTCAGAGAGGTCCAGTCGTGCATCGCAC 204374 ||| | || || || | || | || |||||| | | ||||| ||||| | Sbjct 1277623 GTTCCTCAGGCCATACTGGGCGATATCAGC-CTTCAGGGCTGCCCAGTTGTGCAGGTCCG 1277565 Query 204375 TGGGTTTCACGCCCCACATGTCGAACTGAAAGAT 204408 | || | |||||||||||||| |||| ||||| Sbjct 1277564 TTGGGGTGACGCCCCACATGTCATACTGCAAGAT 1277531 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795137656888400