Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq176 113 5e-20 seq96 84.2 2e-11 >seq176 Length=618158 Score = 113 bits (124), Expect = 5e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 46381 CAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTC 46440 || |||||| |||| || |||||| ||||| |||||||| || || ||||| |||| Sbjct 484173 CAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACCGTC 484114 Query 46441 GTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTC 46500 || |||||||||||||| || |||| ||||||||||||| ||| | || |||||||| Sbjct 484113 CTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCGGGCGGAATGCCTTCCTTGTC 484054 Query 46501 CATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 46545 | |||||| ||| | || | | |||||||| | ||| || Sbjct 484053 CTGGATCTTGGCCTTAACATTCTCGATAGTGTCGCTGGGTTCGAC 484009 >seq96 Length=2115401 Score = 84.2 bits (92), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 46406 TTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATC 46465 |||||||| ||||| || || || ||||| |||| || |||||||||||||| || ||| Sbjct 629319 TTTTGGATGTTGTAATCTGACAGTGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATC 629260 Query 46466 AAGCGCTGCTGGTCGG 46481 || ||||||||||||| Sbjct 629259 AAACGCTGCTGGTCGG 629244 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565225929427800