Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3 190 2e-43 seq176 105 7e-18 seq61 100 3e-16 >seq3 Length=4565964 Score = 190 bits (210), Expect = 2e-43 Identities = 220/295 (75%), Gaps = 6/295 (2%) Strand=Plus/Plus Query 133167 GTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAA 133226 |||||||||||| || ||||| || ||||| | |||||| ||||| || || || Sbjct 1995578 GTAGGTGTCGATAAGCAAGCTGTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGGAA 1995637 Query 133227 GCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATT 133286 ||| || ||||| || |||||| ||||||||| || || ||| ||||| |||| || Sbjct 1995638 GCCATAGAAGCAGCGGGCCTCGGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAGTT 1995697 Query 133287 TTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCG 133346 || |||||||||||||| |||||||| || |||||||| || ||| |||||| || Sbjct 1995698 CTCATTGACGATGCCGTCACTGGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGTTT 1995757 Query 133347 CTCGTTGTCGTTCAAGCGC---TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTC 133403 ||| || ||| | || |||||||| | |||||||| || || |||||||| Sbjct 1995758 CTC---CTCCTTCTTGAGCATTTCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTC 1995814 Query 133404 GACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATAT 133458 || ||||| || ||||||||||| ||||||||||| ||| |||||| || || Sbjct 1995815 TACTGTCCAGAAAGACGCCTCGGCCTTTTTGTACATCTCCCAGATGTCCTAAAAT 1995869 >seq176 Length=618158 Score = 105 bits (116), Expect = 7e-18 Identities = 114/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 38320 TTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACG 38379 |||| | || |||| ||||| || || ||||| ||||||| |||||||| || | | Sbjct 484037 TTAAGGCCAAGATCCAGGACAAGGAAGGCATTCCGCCCGACCAGCAGCGGCTGATCTTTG 484096 Query 38380 CGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGA 38439 | ||||| |||||||| |||| |||||||| |||||||||||||| ||||| | | Sbjct 484097 CCGGCAAGCAGCTGGAGGACGGTCGCACCCTGTCTGACTACAACATCCAGAAGGAGTCCA 484156 Query 38440 CGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 | ||||| |||||||| | || | ||||| Sbjct 484157 CCCTGCACCTGGTGCTGAGGCTGCGGGGCGG 484187 >seq61 Length=1822817 Score = 100 bits (110), Expect = 3e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 133209 CTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGC 133268 |||||| || ||||| ||||| || || || | || || | ||| ||||||||| | Sbjct 745893 CTCCATTGCCATTTGGAAGCCATAGAAACATCTTGCTTCAGGAATCTGAACTTCTTGACC 745834 Query 133269 GAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCAC 133328 || | ||| || ||||| || |||||||||||||| || || || || || ||||| | Sbjct 745833 AAACCTCTCTACTAGATTCTCATTGACGATGCCGTCACTTGCTGCAAAGAATGCCAGGAT 745774 Query 133329 GTGCTTGATGAAATG 133343 ||||||||||||||| Sbjct 745773 GTGCTTGATGAAATG 745759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500161764937600