Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq215 114 1e-19 seq127 95.1 9e-14 seq105 93.3 3e-13 seq129 89.7 4e-12 seq47 87.8 1e-11 >seq215 Length=448669 Score = 114 bits (126), Expect = 1e-19 Identities = 197/283 (70%), Gaps = 5/283 (2%) Strand=Plus/Plus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT-C 518084 |||||| || ||||| || || | | ||| ||| || || |||||| |||||| | Sbjct 365663 ATCAAAGTCGTCACCGCCTAAATGATTATCTCCGTTTGTGGCAATTACTTC-AAAAGTGC 365721 Query 518085 CATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTA 518144 | || | | | | | || |||||| |||||| || || | ||| ||| | | Sbjct 365722 CGTCGCCGATATCAAGCAAAGAAACATCAAAGGTTCCGCCGCCGAGATCGTAAACCAAAA 365781 Query 518145 CATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 518204 || |||||| | || | |||||| || ||||| || || || || ||||| |||| Sbjct 365782 ---TCTTTTCTTCTTTTTTGGTTTTATTAATTCCATAAGCTAACGCCGCTGCAGTCGGTT 365838 Query 518205 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 518264 | ||||||||||| || || | ||| |||||| | ||||||| |||||| |||| || Sbjct 365839 CGTTAATAATTCTTTTTACTTTTAAACCGGCAATTTTGCCTGCATTTTTAGTAGCTTCTC 365898 Query 518265 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATC 518307 ||| || | || ||||| || ||||| ||||| || ||||| Sbjct 365899 GTTGAGAGTTATTGAAATAAGCCGGAACCGTAATTACCGCATC 365941 >seq127 Length=852486 Score = 95.1 bits (104), Expect = 9e-14 Identities = 121/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 518546 ATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACA 518605 || ||| |||||| || || |||||||||||||| ||||| || || || | ||| Sbjct 787965 ATAGCAACTTGATTCTTAGCAGCATCTCCAATCAGTCTCTCTGTGTCAGTGAAGGCGACA 787906 Query 518606 TATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGC 518665 || ||| || || || || |||||||| || ||||| ||||| ||||| ||||| || Sbjct 787905 TAACTTGGTGTGGTCCGGTTGCCTTGATCGTTGGCAATGATTTCCACTTTGCCATTCTGA 787846 Query 518666 CATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGC 518712 | || || ||||| |||| || |||| ||||| || ||||| Sbjct 787845 AAGACTCCAACACACGAGTAAGTCGTGCCTAGGTCAATCCCGATAGC 787799 >seq105 Length=1401018 Score = 93.3 bits (102), Expect = 3e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224 || |||||||||||||| |||| ||||| |||||||| ||||| || | | ||| || Sbjct 1155746 TTCTTATCAAGACCATAAGCAAGGGCAGCTGCAGTTGGCTCATTGATGAGACGCAAGACG 1155805 Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284 || || |||||||| || |||||||| |||||||| | || || || | ||| | Sbjct 1155806 TTGAGGCCAGCAATGGCACCGGCATCTTTGGTGGCTTGGCGCTGGGAGTCACTGAAAAAG 1155865 Query 518285 GCAGGAACAGTAATAACGGCATCAGTTAC 518313 || || || | || |||||||| || || Sbjct 1155866 GCCGGGACGCTGATTACGGCATCGGTGAC 1155894 >seq129 Length=926919 Score = 89.7 bits (98), Expect = 4e-12 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 || ||||| || || ||||| ||||| || ||||| || | ||||||||||| || || Sbjct 858206 GGCTCATTGATGATCCTCAATACATTGAGGCCAGCGATAGTGCCTGCATCTTTGGTTGCC 858265 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA 518320 || | || | |||||| || |||||||||||||| | ||||||| || ||| ||| Sbjct 858266 TGACGCTGGGCATCGTTGAAGTATGCAGGAACAGTGACTACGGCATTTGTAACTGTTTTG 858325 Query 518321 CCAA 518324 |||| Sbjct 858326 CCAA 858329 >seq47 Length=1833283 Score = 87.8 bits (96), Expect = 1e-11 Identities = 120/168 (71%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 518546 ATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACA 518605 || |||| || | |||||||||||| ||||| || || || || || |||| ||| Sbjct 1416377 ATGGCAGACTGGTTTTTGGCTGCATCACCAATGAGTCTCTCCGTGTCCGTGAATGCCACA 1416436 Query 518606 TATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGC 518665 || || || |||||||| ||||| || || ||||| || |||||||| || || || Sbjct 1416437 TAGCTCGGTGTAGTGCGATTGCCTTGCTCGTTGGCAATGATCTCAACTTTGCCGTTCTGG 1416496 Query 518666 CATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 518713 | || ||||||| | || || || || |||||||| |||||| Sbjct 1416497 AAGACCGCTACACAGGAGTATGTCGTGCCCAAGTCAATACCGATAGCA 1416544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780734814886090