Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq31 84.2 3e-11 >seq31 Length=3510018 Score = 84.2 bits (92), Expect = 3e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 112278 TGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGAC 112337 ||| | || ||| | || ||||||| ||||||||||| || || ||||| |||||||| Sbjct 1271264 TGGCAGGCCATTATACAGGCTCAAACGGAGACTGGTACCCCGTACATGCTGTACAAAGAT 1271323 Query 112338 GCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGT 112397 ||||||||| |||||||| || |||| |||| |||||| | ||||| || Sbjct 1271324 GCCTGTAACGGCAAGAGTAACCAGCAGAACCTGGGCACCATCAAGTGCAGTAACCTGTGC 1271383 Query 112398 ACAGAAATCTTGGAAT 112413 || || ||| | |||| Sbjct 1271384 ACGGAGATCATCGAAT 1271399 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 112294 AGTCTCAAACCGAGACTGGTACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGA 112353 || ||||||| ||||||||||| || || ||||| |||||||| ||||||||| |||| Sbjct 1270603 AGGCTCAAACGGAGACTGGTACCCCGTACATGCTGTACAAAGATGCCTGTAACGGCAAGA 1270662 Query 112354 GTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAAT 112413 |||| || |||| |||| |||||| | ||||| || || || ||| | |||| Sbjct 1270663 GTAACCAGCAGAACCTGGGCACCATCAAGTGCAGTAACCTGTGCACGGAGATCATAGAAT 1270722 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620728704870800