Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq3 113 5e-20 seq61 93.3 5e-14 >seq3 Length=4565964 Score = 113 bits (124), Expect = 5e-20 Identities = 162/225 (72%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 ||||||| | || |||| || |||||||| || | ||| |||| | ||| || || | Sbjct 1994781 CCTCGTCGCGGCTGATCAGCTCGTTAGAAAAGGTCAGGCCATGCATTAATCCCCTCTTCT 1994840 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 | |||||||| || ||||||||||| || || ||||| || || || || || || || | Sbjct 1994841 TCAACCAGAAGATGGAAGCAAATGAACCCGAGAAGAAAATGCCCTCCACGGCAGCGAAGG 1994900 Query 19103 CAACTAGTCTTTCTCCATAACTAGCATC-ATTATTA-TGAATCCATTTCAGTGCCCAATC 19160 | || | || || ||||| | | || | | | | ||||| ||||| |||||||| Sbjct 1994901 CCACGACCCTCTCCCCATAGGTGG--TCGAGTCCGAGTTGATCCAGTTCAGAGCCCAATC 1994958 Query 19161 AGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAG 19205 |||||||| || ||||| |||| ||||| || | ||| || || Sbjct 1994959 TGCCTTCTTCTTAACACAAGGCAGAGTCTCAATTGCATTGAACAG 1995003 >seq61 Length=1822817 Score = 93.3 bits (102), Expect = 5e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 19276 TCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAA 19335 || || ||||| || || || || |||||||||||||| | ||||| ||||| || | Sbjct 745892 TCCATTGCCATTTGGAAGCCATAGAAACATCTTGCTTCAGGAATCTGAACTTCTTGACCA 745833 Query 19336 AATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACA 19395 || || || || | ||| ||||| || || || ||||| |||||||| ||||| | | Sbjct 745832 AACCTCTCTACTAGATTCTCATTGACGATGCCGTCACTTGCTGCAAAGAATGCCAGGATG 745773 Query 19396 TGTTTAATAAAATGTTTTTCA 19416 || || || ||||||| |||| Sbjct 745772 TGCTTGATGAAATGTTGTTCA 745752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562096398474600