Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq47 150 1e-30 seq278 95.1 1e-13 seq32 91.5 1e-12 >seq47 Length=1833283 Score = 150 bits (166), Expect = 1e-30 Identities = 289/418 (69%), Gaps = 10/418 (2%) Strand=Plus/Minus Query 550169 AATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAG 550228 || || || |||||||| || ||| | ||||| | | ||| ||||| | |||||||| Sbjct 1415699 AACACAATCTTTGATGCCAAGCGTCTCATTGGTCGTCGATTTGATGATGCATCTGTTCAG 1415640 Query 550229 GCAGATATGAAGCATTGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTG-A 550287 |||||||||||||| ||||| ||| || | || || || | || || || | Sbjct 1415639 GCAGATATGAAGCACTGGCCATTCAAAGTGGTCAACAAGCAAGGGATGCCC-ATCCTGCA 1415581 Query 550288 AGCT--ACTCATGAAGGATCTGTTAAACAATTTTC-ACCAGAACAAATTTCATCTATGGT 550344 |||| | |||||| || | || | ||| | |||||| |||| || ||||| Sbjct 1415580 AGCTGAATACATGAATGA---GACCAAGACTTTCCCACCAGAGGAAATCAGCTCCATGGT 1415524 Query 550345 TTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 ||| |||||||| | ||||| |||| | |||| || |||| | |||||| || Sbjct 1415523 CCTAACAAAAATGAAGGAGACAGCTGAGGCTTATCTTGGACAGAAAGTCAAGGATGCTGT 1415464 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 || ||||| || ||||| || |||||||| || | || ||||| || |||||||| Sbjct 1415463 CATCACTGTGCCGGCATACTTCAATGACTCCCAGAGACAGGCTACCAAGGATGCTGGGAT 1415404 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 |||||||| || ||||| || | || ||||| |||||||| || ||||| | || || Sbjct 1415403 GATTGCTGGGCTCAATGTCCTCAGGATCATCAACGAACCTACAGCAGCTGCCTTGGCCTA 1415344 Query 550525 TGGACTTGATAAACATAATGA-TCAAGAACTTAATGTACTCATCTTTGATTGTGGAGG 550581 ||||| || || | | ||| | || |||| |||||||||||| ||| || Sbjct 1415343 CGGACTGGACAAGAA-ACTGAGTGGGGAGAAGCATGTCCTCATCTTTGATCTTGGGGG 1415287 Score = 136 bits (150), Expect = 3e-26 Identities = 257/371 (69%), Gaps = 8/371 (2%) Strand=Plus/Minus Query 552208 TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGAC 552267 ||||||||||||| || || |||||||| ||||| |||| ||||| || | ||| | Sbjct 1414804 TTAATCCAGATGAAGCAGTAGCCTATGGAGCCGCTGTTCAGGCAGCCATCTTGAGTGG-C 1414746 Query 552268 AAACTGA-TGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 | | || | | | || | || || | ||||| |||||| ||||| | || ||||| Sbjct 1414745 GACCAGAGTTCAGAGGTAAAGGATGTTCTTCTTGTGGATGTTGCTCCTTTGTCACTTGGC 1414686 Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386 | || |||| ||| || || |||||||| | ||||| |||| || || || Sbjct 1414685 ATTGAGACAGCTGGTGGCATCATGACTAAATTGATCGAGCGAAACACCCGCATCCCCACC 1414626 Query 552387 AAAAAATCTCGTGTATTTT-CTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAAT 552445 |||| ||| | | ||| | || ||||| |||||||| |||||||||| | || | Sbjct 1414625 AAAACATC-CAAGACTTTCACCACCTATTCCGATAATCAGCCTGCTGTTACCGTGCAGGT 1414567 Query 552446 TTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAA--TTTA 552503 |||||| ||||| ||| | || ||||| || | |||||| ||| | ||| Sbjct 1414566 TTTTGAGGGAGAGAGAGCCATGACAAAAGACAACCACTGTCTTGGTGTATTTGAACTTTC 1414507 Query 552504 GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGAT 552563 | || || |||| |||||||||||| ||||| | || || || || || ||||| ||| Sbjct 1414506 G--GGCATCCCTCTTGCTCCTCGTGGTGTACCCAAGATCGAGGTCACCTTGGATATTGAT 1414449 Query 552564 GCCAATGGAAT 552574 || ||||| || Sbjct 1414448 GCTAATGGTAT 1414438 >seq278 Length=661463 Score = 95.1 bits (104), Expect = 1e-13 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 550398 ATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATG 550457 |||| || || || || || || || || |||||||| || || |||||||| ||||||| Sbjct 649377 ATGCTGTGATCACCGTCCCGGCTTACTTCAATGACTCCCAGCGCCAAGCTACAAAAGATG 649318 Query 550458 CTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCAC 550517 |||| || |||| || ||||| | ||||| |||||||| || || || ||||| Sbjct 649317 CTGGTGCCATCTCTGGCCTCAATGTCTTGCGTATCATCAATGAGCCCACCGCAGCTGCCA 649258 Query 550518 TTGCATATGGACTTGATAAA 550537 |||| || || || |||||| Sbjct 649257 TTGCGTACGGTCTGGATAAA 649238 >seq32 Length=1878114 Score = 91.5 bits (100), Expect = 1e-12 Identities = 70/83 (84%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 550445 GCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCT 550504 || || ||||||||||||| ||||| ||||| ||||||||| | | ||||||||||| Sbjct 1517266 GCCACAAAAGATGCTGGACAGATTGCCGGACTCAATGTTCTTAGGGTAATCAATGAACCA 1517325 Query 550505 ACTGCTGCTGCACTTGCATATGG 550527 |||||||||||||| || ||||| Sbjct 1517326 ACTGCTGCTGCACTGGCTTATGG 1517348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029202658839850