Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq31 132 9e-26 seq3 125 1e-23 seq61 120 6e-22 seq39 100 5e-16 >seq31 Length=3510018 Score = 132 bits (146), Expect = 9e-26 Identities = 158/215 (73%), Gaps = 12/215 (6%) Strand=Plus/Minus Query 213141 CCTTTGCTCACGGGGCTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 |||||||| | ||| ||||| ||| | |||||| || |||||||||||||| ||| Sbjct 1275641 CCTTTGCTGGCCGGGGAGCCCTCGTAGGTCTCGTAGGGTCCCTGCTCCTTGGCCAGATCG 1275582 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 ||| ||| |||||| |||||||||||||| ||||| |||| |||||||||||| | Sbjct 1275581 CAGCTTGCCCTCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTGAGCTTCTGG 1275522 Query 213261 GCCTCTGGG------GACGTGAAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCC 213314 ||||| ||| | | |||| ||||| | || ||| | || ||||| ||| Sbjct 1275521 GCCTCGGGGCTCTCAAAGGGGAAGCGCATCTTGAT------GAAAGCGTCGGCCAGGCCC 1275468 Query 213315 TGGACCCCGATGCCGATGGGTCTGTGTCTCAGGTT 213349 || ||||||||||| ||||| | ||| | | |||| Sbjct 1275467 TGCACCCCGATGCCAATGGGGCGGTGACGCCGGTT 1275433 Score = 96.9 bits (106), Expect = 6e-15 Identities = 171/243 (70%), Gaps = 5/243 (2%) Strand=Plus/Minus Query 213718 ACTGTTCGTAGAGCTCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGGATG 213777 ||||||||||||| | || || || | ||||||| | | || || || | Sbjct 1270091 ACTGTTCGTAGAGTTTGTCAAACTCCTTGCCCCAGCACTCGGACAACCCTGGGCTCTCGT 1270032 Query 213778 CGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGACT-CTCTGCATGAACAGGTCCGGG 213836 ||| ||||| |||| ||||||| ||| | ||| | | | | |||||||||||| || Sbjct 1270031 TGGGGCACATCAGGCACCAGTCCTGGTCGT-TCTCAATGCGCCTCATGAACAGGTCTGGT 1269973 Query 213837 ACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTT-TTTGCG 213895 | |||||| ||| ||| ||||| | || || | ||| ||| || ||| || | Sbjct 1269972 ATCCACAGGGCGTAGAAGAGGTCACGGGCCCGCTGCTCTTCCTTGCCGTGGTTCTTCTTG 1269913 Query 213896 CAGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCC 213955 ||| || || || || |||||||| |||||||| ||||||| ||| | ||||||||| || Sbjct 1269912 CAG-TCCAGGAAATCGAAGATGTCGGCGTGCCAGGGCTCCAGGTACACGGCAAAGGC-CC 1269855 Query 213956 CGG 213958 ||| Sbjct 1269854 CGG 1269852 Score = 95.1 bits (104), Expect = 2e-14 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 212915 TATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGAT 212974 || |||||| || || ||||||||||| | || | ||| ||||||||||| || Sbjct 1277746 TACCTGGAATTCTCCCGAGAGCACCCTGCGGGTATAGATGTTACTGGTGTAGGGCTCAAT 1277687 Query 212975 GCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAG 213034 | ||| ||||| |||| ||||| |||||| ||| ||||||||||| || | ||| || Sbjct 1277686 GGACTCATTGTTGCCCAAGATCTGGGCAGTGGAGGCCGTGGGCATGGGGGCAATCAGCAG 1277627 Query 213035 ACTGTTCCTCACTCCGTGCTCGCCGAT 213061 |||||||||| || | || | |||| Sbjct 1277626 GCTGTTCCTCAGGCCATACTGGGCGAT 1277600 Score = 93.3 bits (102), Expect = 8e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 213530 GTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTT 213589 ||| || |||||||| ||||||||||| ||||| |||||||||||||||||| ||||| Sbjct 1270724 GTATTCTATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTT 1270665 Query 213590 TGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTC 213640 ||| |||| | ||| ||||| |||||||| |||| || ||||| Sbjct 1270664 ACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTC 1270614 Score = 93.3 bits (102), Expect = 8e-14 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 213530 GTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTT 213589 ||| || |||||||| ||||||||||| ||||| |||||||||||||||||| ||||| Sbjct 1271401 GTATTCGATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTT 1271342 Query 213590 TGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTC 213640 ||| |||| | ||| ||||| |||||||| |||| || ||||| Sbjct 1271341 ACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTC 1271291 >seq3 Length=4565964 Score = 125 bits (138), Expect = 1e-23 Identities = 189/267 (71%), Gaps = 4/267 (1%) Strand=Plus/Plus Query 48424 GTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTC 48483 ||||||||| ||||| | ||||| || || |||||||| || |||||| | |||||| Sbjct 1995599 GTACATCTCTGAGTGGATGTTCTCGATGGCTATCTGGAAGCCATAGAAGCAGCGGGCCTC 1995658 Query 48484 AAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGA 48543 ||||||||| || | ||| | ||||| || ||||||||||| || || || Sbjct 1995659 GGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAGTTCTCATTGACGATGCCGTCACT 1995718 Query 48544 AGCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATT 48603 || ||||||||||| |||||||| | ||| || ||| | | | ||||||| Sbjct 1995719 GGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGTTTCTCCTCCTTCTT--GAGCATT 1995776 Query 48604 --CCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661 |||| || ||| || ||| || || || || || || |||||||| ||||| Sbjct 1995777 TCCCAGTCCGGTAGATCCTTGGAGAGATCAACCTCCTCTACTGTCCAGAAAGACGCCTCG 1995836 Query 48662 GCTTTTTTGTACATGCCCCATATGTCC 48688 || ||||||||||| |||| |||||| Sbjct 1995837 GCCTTTTTGTACATCTCCCAGATGTCC 1995863 Score = 114 bits (126), Expect = 2e-20 Identities = 155/215 (72%), Gaps = 6/215 (3%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| |||||||| ||| |||| || ||| || ||| |||| | ||||||| || Sbjct 1994783 TCGTCGCGGCTGATCAGCTCGTTAGAAAAGGTCAGGCCATGCATTAATCCCCTCTTCTTC 1994842 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 | |||||| || | || || || || |||||||| ||||||||||| || ||||| || Sbjct 1994843 AACCAGAAGATGGAAGCAAATGAACCCGAGAAGAAAATGCCCTCCACGGCAGCGAAGGCC 1994902 Query 48275 GTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA---GATCCAGGAAAGCGCCCAGTCT 48331 || |||||| || | | | | || ||| || ||||||| || ||||| ||| Sbjct 1994903 ACGACCCTCTCCCC---ATAGGTGGTCGAGTCCGAGTTGATCCAGTTCAGAGCCCAATCT 1994959 Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGC 48366 ||||||||||| | || |||| ||||| || || Sbjct 1994960 GCCTTCTTCTTAACACAAGGCAGAGTCTCAATTGC 1994994 >seq61 Length=1822817 Score = 120 bits (132), Expect = 6e-22 Identities = 116/149 (78%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 48205 CCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGC 48264 ||||| ||| | ||| || ||||| || || || ||||||||||||||||| |||||||| Sbjct 748189 CCTCTTTTTCAACCAAAATATTGCAGCAAACGATCCAGAGAAGAAGATGCCTTCCACTGC 748130 Query 48265 CGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGC 48324 || || || ||||||||||||| || | ||| | |||| | |||||| | || Sbjct 748129 AGCAAATGCAATGAGCCTCTCTCCAAATGTAGCTTCCTTGGCATGGATCCATCGTATGGC 748070 Query 48325 CCAGTCTGCCTTCTTCTTGATGCATGGCA 48353 ||||||||| |||||||||| ||||||| Sbjct 748069 CCAGTCTGCTTTCTTCTTGACACATGGCA 748041 >seq39 Length=1772223 Score = 100 bits (110), Expect = 5e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Minus Query 241489 CTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCA 241548 |||||| | || ||||| |||||||| |||| |||||| ||||| || || || | ||| Sbjct 798539 CTTGAGTTCTTTGACTTTTTCCTCCAGACGCGAGATGCGCTCCAGCTTTCGTCGTCTGCA 798480 Query 241549 TTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTC 241608 ||| ||||||| | ||||| | |||| ||| || ||||||||||| | ||||| Sbjct 798479 CTTGCTGGCTGCTACCCGGTTTCTCAGTCGCTTCCGCTCCGCCTTGATCCTCTCCTGTGA 798420 Query 241609 CTCCATGTCGATCGGAGA 241626 |||||||| ||| || || Sbjct 798419 CTCCATGTTGATGGGGGA 798402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931512248057600