Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq3 111 3e-19 seq31 102 2e-16 >seq3 Length=4565964 Score = 111 bits (122), Expect = 3e-19 Identities = 142/192 (74%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 25819 AAGAGGAAGGCGCGGTGGGCCATGAAGTGGATCAACAGCCAGAG-CG-CTACGTTTGGCG 25876 |||| |||||| ||||| |||| ||||||||| | || || | || | ||| | Sbjct 1994970 AAGAAGAAGGCAGATTGGGCTCTGAACTGGATCAACT--CGGACTCGACCACCTATGGGG 1994913 Query 25877 AGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCA 25936 || || | || ||||| ||||| ||||||||||| || ||| ||||| ||||| ||| Sbjct 1994912 AGAGGGTCGTGGCCTTCGCTGCCGTGGAGGGCATTTTCTTCTCGGGTTCATTTGCTTCCA 1994853 Query 25937 TCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCA 25996 |||||||| | ||| ||| ||| |||| || ||| |||||| |||||||| |||| Sbjct 1994852 TCTTCTGGTTGAAGAAGAGGGGATTAATGCATGGCCTGACCTTTTCTAACGAGCTGATCA 1994793 Query 25997 GCAGGGACGAGG 26008 || | ||||||| Sbjct 1994792 GCCGCGACGAGG 1994781 Score = 89.7 bits (98), Expect = 1e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 26245 AACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAG 26304 ||||| || ||||||||||||||||| ||| |||| || ||||| || |||||||| ||| Sbjct 1993712 AACCCTTTTGACTTTATGGAAAACATCTCGCTGGAGGGTAAGACAAATTTCTTTGAGAAG 1993653 Query 26305 AGGGTCGGCGACTATCA 26321 ||||||||||| || || Sbjct 1993652 AGGGTCGGCGAGTACCA 1993636 Score = 87.8 bits (96), Expect = 3e-12 Identities = 182/268 (68%), Gaps = 10/268 (4%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 || || |||||||||||||| ||||| | || |||||| | || ||| ||||| Sbjct 1995862 GACATCTGGGAGATGTACAAAAAGGCCGAGGCGTCTTTCTGGACAGTAGAGGAGGTTGAT 1995803 Query 25534 CTGGCCAAGGACATGGACGGCTGG--TACGCTCTATCCAAAGACGAGCAGCATTTTCTCA 25591 || ||||||| | | |||| | |||| | || || ||| | || || || Sbjct 1995802 CTCTCCAAGGATCTACCGGACTGGGAAATGCTCAA--GAAGGAGGAGAAACACTTCATCT 1995745 Query 25592 AGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGA 25651 | | || |||| |||||||| ||| ||| || || || || ||||| || ||| Sbjct 1995744 CGCATGTCCTGGCCTTCTTTGCCGCCAGTGACGGCATCGTCAATGAGAACTTGGTGGAGC 1995685 Query 25652 GATTCACCAGGGAAGTGCAGTACGTG---GAGGCCAAGTGTTTCTACGGTTTCCAGATGG 25708 | |||| | ||| |||||| ||| |||||| || ||||| || |||||||| | Sbjct 1995684 GCTTCAGCCAGGAGGTGCAG---GTGCCCGAGGCCCGCTGCTTCTATGGCTTCCAGATAG 1995628 Query 25709 CCATCGAAAATGTGCACTCTGAGGTGTA 25736 ||||||| || | ||||| ||| |||| Sbjct 1995627 CCATCGAGAACATCCACTCAGAGATGTA 1995600 >seq31 Length=3510018 Score = 102 bits (112), Expect = 2e-16 Identities = 142/194 (73%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 221366 CCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCG-TCAGGGC 221424 || ||||| | ||||||||| || | | | |||| | |||| | ||| ||||||| Sbjct 1275623 CCCTCGTAGGTCTCGTAGGGTCCCTGCTCCTTGGCCAGATCGCA-GCTTGCCCTCAGGGC 1275565 Query 221425 AGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTGAA 221484 |||| ||||||||||||||||||| ||||||| ||| ||||||||| || Sbjct 1275564 GGCGTAGTAGATGGTCTCAAAGATCTGGATGTTGAGCTTCTGGGCCTCGGGGCTCTCAAA 1275505 Query 221485 GGGCATACGCAGCAT-CTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGCC 221543 ||| | |||| | | |||||| |||||||||| ||||| || ||||| || ||||| | Sbjct 1275504 GGGGAAGCGCATCTTGATGAAAG-CGTCGGCCAGGCCCTGCACCCCGATGCCAATGGGGC 1275446 Query 221544 TGTGTCTCCTGTTG 221557 ||| | || |||| Sbjct 1275445 GGTGACGCCGGTTG 1275432 Score = 96.9 bits (106), Expect = 6e-15 Identities = 104/136 (76%), Gaps = 4/136 (3%) Strand=Plus/Minus Query 221123 ACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAG--GTTAGAAGTGAACGGTTCGA 221180 || ||||| ||||||||||||||||| | |||| || |||| ||| | || || | Sbjct 1277745 ACCTGGAATTCTCCCGAGAGCACCCTGCG--GGTATAGATGTTACTGGTGTAGGGCTCAA 1277688 Query 221181 TGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCACCAGCA 221240 || ||| |||||||||| |||||| || ||| ||| ||||||||||| || | ||||| Sbjct 1277687 TGGACTCATTGTTGCCCAAGATCTGGGCAGTGGAGGCCGTGGGCATGGGGGCAATCAGCA 1277628 Query 221241 GACTGTTGCGCAGTCC 221256 | ||||| | ||| || Sbjct 1277627 GGCTGTTCCTCAGGCC 1277612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928824307361600