Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq31 89.7 6e-13 >seq31 Length=3510018 Score = 89.7 bits (98), Expect = 6e-13 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 75899 CAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAAC 75958 || ||||||||||| || || || ||||| ||||| ||||| |||||| ||||||||| Sbjct 1270608 CAAACGGAGACTGGTACCCCGTACATGCTGTACAAAGATGCCTGTAACGGCAAGAGTAAC 1270667 Query 75959 CAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 || |||| |||| || |||||| || || || |||||||| || |||| ||| Sbjct 1270668 CAGCAGAACCTGGGCACCATCAAGTGCAGTAACCTGTGCACGGAGATCATAGAATAC 1270724 Score = 87.8 bits (96), Expect = 2e-12 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 75878 TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGAT 75937 ||| |||| ||| | | | || ||||||||||| || || || ||||| ||||| ||| Sbjct 1271264 TGGCAGGCCATTATACAGGCTCAAACGGAGACTGGTACCCCGTACATGCTGTACAAAGAT 1271323 Query 75938 GCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGC 75997 || |||||| ||||||||||| |||| |||| || |||||| || || || ||| Sbjct 1271324 GCCTGTAACGGCAAGAGTAACCAGCAGAACCTGGGCACCATCAAGTGCAGTAACCTGTGC 1271383 Query 75998 ACGGAAAT 76005 ||||| || Sbjct 1271384 ACGGAGAT 1271391 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596556438183200