Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 152 6e-31 seq40 129 7e-24 seq66 125 9e-23 seq181 120 4e-21 seq31 120 4e-21 seq13 114 2e-19 seq11 105 8e-17 >seq3 Length=4565964 Score = 152 bits (168), Expect = 6e-31 Identities = 185/250 (74%), Gaps = 4/250 (2%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||||||||| ||||||||||| || ||| | |||| | ||| || Sbjct 1995609 GAGTGGATGTTCTCGATGGCTATCTGGAAGCCATAGAAGCAGCGGGCCTCGGGCACCTGC 1995668 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 ||||||| |||| || | ||| |||||| ||||||||||| |||||||| || Sbjct 1995669 ACCTCCTGGCTGAAGCGCTCCACCAAGTTCTCATTGACGATGCCGTCACTGGCGGCAAAG 1995728 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || |||||||| ||| ||| ||||| ||| || | ||||| |||||| || Sbjct 1995729 AAGGCCAGGACATGCGAGATGAAGTGTTTCTCCTCCTTCTTGAGCATTTCCCAGT--CCG 1995786 Query 869813 GT--GTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGT 869870 || || | ||| || |||||||| | ||||||| || |||||||||||||||| Sbjct 1995787 GTAGATCCTTGGAGAGATCAACCTCCTCTACTGTCCAGAAAGACGCCTCGGCCTTTTTGT 1995846 Query 869871 ACATCTCCCA 869880 |||||||||| Sbjct 1995847 ACATCTCCCA 1995856 Score = 95.1 bits (104), Expect = 1e-13 Identities = 140/193 (73%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 868817 CGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCC 868876 |||||||| |||||||| |||||||| |||||| ||| |||||||| ||||| | Sbjct 1993928 CGGTCGGCCACAAACTCTATGTACTGCTTCATGAGCGTGGCATTCATGCCAATGAGGGAG 1993987 Query 868877 ACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGC 868936 ||||| | || ||| ||||| | ||||||| ||| || || |||||| || Sbjct 1993988 CAGGGCAGGGCGTCTGTCAGGAACTCCTGCTCGATCAGGACAGCTTCCCTGATGATG-GC 1994046 Query 868937 CTGGGCACG-TCGGCCGAGGGCTTGTTGACGAGCATCG-TGTAGAGCAGGCAGGCAAAGT 868994 || | || || |||| ||||||| ||| || || | || | | ||||||||||||| Sbjct 1994047 CTTGATGCGCTCCTCCGACGGCTTGTGGACCAG-ATGGCTGAACATAAGGCAGGCAAAGT 1994105 Query 868995 CGCAGTGCAACCC 869007 | ||||||| ||| Sbjct 1994106 CACAGTGCAGCCC 1994118 >seq40 Length=2006373 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || ||||| || |||||||| | |||||| || || Sbjct 392221 GCTTGGCCAGCTCACCGGGCAGGAGGAGGCGGACAGCGGTCTGCACCTCGCGGCTGGTGA 392280 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| |||| |||| || ||||||| | ||||||| |||| | Sbjct 392281 TGGTGGACTTCTTGTTGTAGTGGGCCAAGCGAGAAGCCTCGGCGGCGATGCGCTCGAAGA 392340 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||| | | |||||||||| |||||||| Sbjct 392341 TGTCGTTGACGAAGCTGTTCATGATGCTCATGGCACGGCTGGAGATGCCGGTGTCGGGGT 392400 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | ||||||||||||| Sbjct 392401 GCACCTGCTTCATCACCTTGTAGATG 392426 >seq66 Length=1493390 Score = 125 bits (138), Expect = 9e-23 Identities = 120/154 (78%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 507735 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTCCGAGACGG 507794 |||||||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 637193 CCTACAACGCCGACTTTGACGGGGACGAGATGAACCTGCACGTGCCCCAGTCCATGGAGA 637252 Query 507795 CGCGCGCCGAGGTGACGCACACCATGAGCGTGTCGCTCAAGACCGTGTCGCCGCAGGCCA 507854 |||| |||||||||||| | | ||||| ||| | | | ||| || | || ||| ||| Sbjct 637253 CGCGGGCCGAGGTGACGGAGATCATGATGGTGCCCCGCCAGATGGTTACCCCACAGTCCA 637312 Query 507855 ACAAGCCCATCATCGGCCTGGTCATGGACGCCCT 507888 || |||| |||| || | || |||| |||| Sbjct 637313 ACCGGCCCGTCATGGGAATTGTGCAGGACTCCCT 637346 >seq181 Length=879208 Score = 120 bits (132), Expect = 4e-21 Identities = 150/206 (73%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || || || || |||||||| | ||| || || || Sbjct 411137 GCTTGGCCAGCTCACCGGGCAGGAGGAGACGGACCGCGGTCTGCACCTCACGGCTGGTGA 411078 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| |||| |||| ||| ||||||| | ||||||| || | | Sbjct 411077 TGGTGGACTTCTTGTTGTAGTGAGCCAAGCGGGAAGCCTCGGCGGCGATGCGCTCAAAGA 411018 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||| | | |||||||||| |||||||| Sbjct 411017 TGTCGTTGACGAAGCTGTTCATGATGCTCATGGCACGGCTGGAGATGCCGGTGTCGGGGT 410958 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | ||||||||||||| Sbjct 410957 GCACCTGCTTCATCACCTTGTAGATG 410932 >seq31 Length=3510018 Score = 120 bits (132), Expect = 4e-21 Identities = 111/141 (79%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 1628442 GCGGCGCATAAAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTC 1628501 ||| | ||| || ||||| ||||||| ||||| |||||||| || ||||| | ||| Sbjct 1269994 GCGCCTCATGAACAGGTCTGGTATCCACAGGGCGTAGAAGAGGTCACGGGCCCGCTGCTC 1269935 Query 1628502 CTCCTTGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTC 1628561 ||||||||||||||||| ||| ||| || | |||| |||||||||||||| ||||| Sbjct 1269934 TTCCTTGCCGTGGTTCTTCTTGCAGTCCAGGAAATCGAAGATGTCGGCGTGCCAGGGCTC 1269875 Query 1628562 CAGGTAGCAGGCAAAGGCGCC 1628582 |||||| ||||||||| || Sbjct 1269874 CAGGTACACGGCAAAGGCCCC 1269854 Score = 86.0 bits (94), Expect = 8e-11 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 1630158 GGCGCGCACCTTGTGCGCGGCAAAGCCGATGCCGCCGGCCGACTTGGAGATGAGCGCGCA 1630217 ||| || | ||||||| || | ||| ||||| ||||||| ||||||||| |||||||| Sbjct 1268621 GGCTCGGATCTTGTGCACGTTGACGCCAATGCCTCCGGCCGTCTTGGAGATCAGCGCGCA 1268562 Query 1630218 CTGTTTGAGCGTGTCGTAGATGCCCTCGAT 1630247 ||| || || ||||||||||| ||||| || Sbjct 1268561 CTGCTTCAGGGTGTCGTAGATCCCCTCAAT 1268532 >seq13 Length=2809586 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || ||| || || |||||||| | ||| || || || Sbjct 2054502 GCTTGGCCAGCTCACCGGGCAGGAGCAGACGGACTGCGGTCTGCACCTCACGGCTGGTGA 2054443 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| |||| |||||||| || || | ||||||| || | | Sbjct 2054442 TGGTGGACTTCTTGTTGTAGTGGGCCAGACGAGAAGCTTCAGCAGCGATGCGCTCAAAGA 2054383 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| || |||||||| ||| | | |||||||||| |||||||| Sbjct 2054382 TGTCGTTGACGAAGCTGTTCATGATGCTCATGGCACGGCTGGAGATGCCGGTGTCGGGGT 2054323 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | ||||||||||||| Sbjct 2054322 GCACCTGCTTCATCACCTTGTAGATG 2054297 >seq11 Length=3137503 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| || || || || |||||||||| ||| || || || Sbjct 1687696 GCTTGGCCAGCTCACCGGGCAGGAGGAGACGGACAGCGGTCTGGACCTCACGGCTGGTGA 1687755 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| |||||| |||| |||||||| || |||| ||||||| |||| | Sbjct 1687756 TGGTGGACTTCTTGTTGTAGTGGGCCAGACGTGAAGCTTCGGCAGCGATGCGCTCGAAGA 1687815 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||| || || |||||||| ||| | | | |||||||| ||| || | Sbjct 1687816 TGTCGTTCACGAAGCTGTTCATGATACTCATGGCACGGCTTGAGATGCCGGTGTCAGGAT 1687875 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 |||||||||| | ||||||||||||| Sbjct 1687876 GCACCTGCTTCATCACCTTGTAGATG 1687901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106994355834505