Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq176 98.7 9e-16 seq31 91.5 1e-13 >seq176 Length=618158 Score = 98.7 bits (108), Expect = 9e-16 Identities = 129/179 (72%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 24752 GTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATA 24811 || ||| ||| |||||| | || | || || |||||||| ||||| ||||| || Sbjct 484009 GTCGAACCCAGCGACACTATCGAGAATGTTAAGGCCAAGATCCAGGACAAGGAAGGCATT 484068 Query 24812 CCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATG 24871 || ||||| || || || ||||||||||||| || ||||||||||| | | | || Sbjct 484069 CCGCCCGACCAGCAGCGGCTGATCTTTGCCGGCAAGCAGCTGGAGGACGGTCGCACCCTG 484128 Query 24872 TCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 || || || ||||| || ||||| || || || ||| ||||| || | |||| || || Sbjct 484129 TCTGACTACAACATCCAGAAGGAGTCCACCCTGCACCTGGTGCTGAGGCTGCGGGGCGG 484187 >seq31 Length=3510018 Score = 91.5 bits (100), Expect = 1e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 139122 GTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATT 139181 |||||||| || || | |||| ||||| |||||||| || || | || || || || Sbjct 1271401 GTATTCGATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCCCAGGTTCTGCTGGTT 1271342 Query 139182 GCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGT 139241 || || | |||||| ||||||||||| ||||| ||||| || ||||| ||| ||| | Sbjct 1271341 ACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACCAGTCTCCGTTTGAGC 1271282 Query 139242 CTCTATAATG 139251 || ||||||| Sbjct 1271281 CTGTATAATG 1271272 Score = 82.4 bits (90), Expect = 7e-11 Identities = 107/148 (72%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 139104 CACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGT 139163 ||| || || ||| | |||||| | || || | |||| ||||| |||||||| || Sbjct 1270742 CACCTCATCTGGGCTGGAGTATTCTATGATCTCCGTGCACAGGTTACTGCACTTGATGGT 1270683 Query 139164 ACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGT 139223 || | || || || || || || | |||||| ||||||||||| ||||| ||||| || Sbjct 1270682 GCCCAGGTTCTGCTGGTTACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGT 1270623 Query 139224 GCCAGTTTCCACTTGTGTCTCTATAATG 139251 ||||| ||| ||| | || ||| ||| Sbjct 1270622 ACCAGTCTCCGTTTGAGCCTGTATGATG 1270595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449887674134200