Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq40 168 1e-35 seq181 159 5e-33 seq13 143 4e-28 seq11 132 8e-25 seq3 125 1e-22 seq31 116 6e-20 seq62 114 2e-19 seq66 100 5e-15 >seq40 Length=2006373 Score = 168 bits (186), Expect = 1e-35 Identities = 182/241 (76%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||||| ||||||| || ||| ||| Sbjct 392182 TGTACTTGGTGACAGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAGCTCACCGGGCA 392241 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || ||||| || |||||||| | ||||||| || ||| ||| |||||| | Sbjct 392242 GGAGGAGGCGGACAGCGGTCTGCACCTCGCGGCTGGTGATGGTGGACTTCTTGTTGTAGT 392301 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| ||| ||||||| | ||||||| |||| ||||||||||| || ||||| Sbjct 392302 GGGCCAAGCGAGAAGCCTCGGCGGCGATGCGCTCGAAGATGTCGTTGACGAAGCTGTTCA 392361 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | | |||||||||| |||||||||||||||||| | |||||||| Sbjct 392362 TGATGCTCATGGCACGGCTGGAGATGCCGGTGTCGGGGTGCACCTGCTTCATCACCTTGT 392421 Query 1485710 A 1485710 | Sbjct 392422 A 392422 >seq181 Length=879208 Score = 159 bits (176), Expect = 5e-33 Identities = 180/241 (75%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| |||||||| || || |||||||||| ||||||| || ||| ||| Sbjct 411176 TGTACTTGGTGACAGCCTTGGTGCCTTCGCTGACGGCGTGCTTGGCCAGCTCACCGGGCA 411117 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || || |||||||| | ||| ||| || ||| ||| |||||| | Sbjct 411116 GGAGGAGACGGACCGCGGTCTGCACCTCACGGCTGGTGATGGTGGACTTCTTGTTGTAGT 411057 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | |||| |||| ||||||| | ||||||| || | ||||||||||| || ||||| Sbjct 411056 GAGCCAAGCGGGAAGCCTCGGCGGCGATGCGCTCAAAGATGTCGTTGACGAAGCTGTTCA 410997 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | | |||||||||| |||||||||||||||||| | |||||||| Sbjct 410996 TGATGCTCATGGCACGGCTGGAGATGCCGGTGTCGGGGTGCACCTGCTTCATCACCTTGT 410937 Query 1485710 A 1485710 | Sbjct 410936 A 410936 >seq13 Length=2809586 Score = 143 bits (158), Expect = 4e-28 Identities = 175/239 (73%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 1485472 TACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCATG 1485531 ||||||||||||||||| || || || |||||||||| ||||||| || ||| ||| | Sbjct 2054539 TACTTGGTGACGGCCTTTGTGCCTTCGCTGACGGCGTGCTTGGCCAGCTCACCGGGCAGG 2054480 Query 1485532 ATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGCGC 1485591 | ||| || || |||||||| | ||| ||| || ||| ||| |||||| | | Sbjct 2054479 AGCAGACGGACTGCGGTCTGCACCTCACGGCTGGTGATGGTGGACTTCTTGTTGTAGTGG 2054420 Query 1485592 GCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATG 1485651 ||||| || || || | ||||||| || | ||||||||||| || ||||||| Sbjct 2054419 GCCAGACGAGAAGCTTCAGCAGCGATGCGCTCAAAGATGTCGTTGACGAAGCTGTTCATG 2054360 Query 1485652 ATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGTA 1485710 || ||| | | |||||||||| |||||||||||||||||| | ||||||||| Sbjct 2054359 ATGCTCATGGCACGGCTGGAGATGCCGGTGTCGGGGTGCACCTGCTTCATCACCTTGTA 2054301 >seq11 Length=3137503 Score = 132 bits (146), Expect = 8e-25 Identities = 174/241 (72%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 ||||||||||||| ||||| || || || |||||||||| ||||||| || ||| ||| Sbjct 1687657 TGTACTTGGTGACAGCCTTCGTGCCTTCACTGACGGCGTGCTTGGCCAGCTCACCGGGCA 1687716 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || || |||||||||| ||| ||| || ||| ||| |||||| | Sbjct 1687717 GGAGGAGACGGACAGCGGTCTGGACCTCACGGCTGGTGATGGTGGACTTCTTGTTGTAGT 1687776 Query 1485590 GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCA 1485649 | ||||| || || |||| ||||||| |||| |||||||| || || ||||| Sbjct 1687777 GGGCCAGACGTGAAGCTTCGGCAGCGATGCGCTCGAAGATGTCGTTCACGAAGCTGTTCA 1687836 Query 1485650 TGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCACCTTGT 1485709 |||| ||| | | | |||||||| ||| || ||||||||||| | |||||||| Sbjct 1687837 TGATACTCATGGCACGGCTTGAGATGCCGGTGTCAGGATGCACCTGCTTCATCACCTTGT 1687896 Query 1485710 A 1485710 | Sbjct 1687897 A 1687897 >seq3 Length=4565964 Score = 125 bits (138), Expect = 1e-22 Identities = 159/217 (73%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 796141 AAACACCTGGCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCC 796200 || || | ||||||||| || || ||||||| ||||||| | ||| ||||||| Sbjct 1995645 AAGCAGCGGGCCTCGGGCACCTGCACCTCCTGGCTGAAGCGCTCCACCAAGTTCTCATTG 1995704 Query 796201 ACGATGCCGTCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCG 796260 ||||||||||| |||||||| || ||||| ||||| ||| ||| ||||| ||| || Sbjct 1995705 ACGATGCCGTCACTGGCGGCAAAGAAGGCCAGGACATGCGAGATGAAGTGTTTCTCCTCC 1995764 Query 796261 TCGCTGAGCGAGACCCAGTGGACCGT--GTCGGCGCCGAGGTCGACCTCCTCGGCGGTCC 796318 | ||||| |||||| | || || | ||| || |||||||| | |||| Sbjct 1995765 TTCTTGAGCATTTCCCAGT--CCGGTAGATCCTTGGAGAGATCAACCTCCTCTACTGTCC 1995822 Query 796319 AAAAGGAGGCCTCGGCCTTTTTGTACATCTCCCATAT 796355 | || || |||||||||||||||||||||||||| || Sbjct 1995823 AGAAAGACGCCTCGGCCTTTTTGTACATCTCCCAGAT 1995859 Score = 91.5 bits (100), Expect = 2e-12 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 794025 CGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCC 794084 |||||||| || || || |||||||| |||||| | ||| |||||||| ||||| | Sbjct 1993928 CGGTCGGCCACAAACTCTATGTACTGCTTCATGAGCGTGGCATTCATGCCAATGAGGGAG 1993987 Query 794085 ACGGGCAGCGACTCGCTGACAAACTCTTTCTCGATCTCGACGGCCTCGATGATGATCTGC 794144 |||||| | || | | ||||| | ||||||| ||| || || ||||||| || Sbjct 1993988 CAGGGCAGGGCGTCTGTCAGGAACTCCTGCTCGATCAGGACAGCTTCCCTGATGATG-GC 1994046 Query 794145 CTGGGCACG-TCGGACGACGGCTTGTCGACGAGCATCG-TGTAGAGCAGGCAGGCAAAGT 794202 || | || || ||||||||||| ||| || || | || | | ||||||||||||| Sbjct 1994047 CTTGATGCGCTCCTCCGACGGCTTGTGGACCAG-ATGGCTGAACATAAGGCAGGCAAAGT 1994105 Query 794203 CGCAATGCAGACC 794215 | || ||||| || Sbjct 1994106 CACAGTGCAGCCC 1994118 Score = 91.5 bits (100), Expect = 2e-12 Identities = 78/95 (82%), Gaps = 1/95 (1%) Strand=Plus/Plus Query 794573 CCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGA 794632 |||| ||| | |||||| || |||||||||||| || | ||| |||||||||||| Sbjct 1995557 CCTT-TCGTCTGGGTCCCGGATGTAGGTGTCGATAAGCAAGCTGTACATCTCTGAGTGGA 1995615 Query 794633 TGTTTTCGATGGCGATCTGGAAGCCATAAAAGCAG 794667 |||| |||||||| |||||||||||||| |||||| Sbjct 1995616 TGTTCTCGATGGCTATCTGGAAGCCATAGAAGCAG 1995650 >seq31 Length=3510018 Score = 116 bits (128), Expect = 6e-20 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 2071791 GCACTCGTGCAGGCCGGGCGCCTCGGACGGGCAAAAGAGCGACCAGTCGCCGCCAGTCAC 2071850 ||||||| || || || |||| ||||| | || ||||||| | | || | Sbjct 1270057 GCACTCGGACAACCCTGGGCTCTCGTTGGGGCACATCAGGCACCAGTCCTGGTCGTTCTC 1269998 Query 2071851 CACGCGGCGCATAAACAGGTCGCACGTCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTT 2071910 | ||| | ||| |||||||| |||||||| |||| ||||| || || ||||| | Sbjct 1269997 AATGCGCCTCATGAACAGGTCTGGTATCCACAGGGCGTAGAAGAGGTCACGGGCCCGCTG 1269938 Query 2071911 CTCCTCCTTGCCGTGGTTCTTTTTCAGGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGG 2071970 ||| ||||||||||||||||| || ||| || | |||| || |||||||||||| || Sbjct 1269937 CTCTTCCTTGCCGTGGTTCTTCTTGCAGTCCAGGAAATCGAAGATGTCGGCGTGCCAGGG 1269878 Query 2071971 CTCCAGGTAGCAGGCAAAGGCGCC 2071994 ||||||||| ||||||||| || Sbjct 1269877 CTCCAGGTACACGGCAAAGGCCCC 1269854 >seq62 Length=3594205 Score = 114 bits (126), Expect = 2e-19 Identities = 163/227 (72%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 1485470 TGTACTTGGTGACGGCCTTGGTACCCTCTGAGACGGCGTGCCTGGCCAGTTCGCCGCGCA 1485529 |||| |||||||| |||||||| || || ||| |||||| |||||||||||||| ||| Sbjct 2769645 TGTATTTGGTGACTGCCTTGGTGCCTTCGCTGACTGCGTGCTTGGCCAGTTCGCCGGGCA 2769704 Query 1485530 TGATCAGGCGCACGGCGGTCTGGATCTCGCGGGTGCCGATCGTGTTGCGCTTGTTAGTGC 1485589 || || || ||||| ||||| | ||| ||| ||| ||| || |||||| || | Sbjct 2769705 GGAGGAGACGAACGGCCGTCTGCACCTCTCGGCTGCTGATGGTAGACTTCTTGTT-GTAC 2769763 Query 1485590 -GCGCCAGGCGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTC 1485648 | |||| |||| ||||| | |||| || |||| ||||||||||| || |||| Sbjct 2769764 TGGGCCAAGCGGGAAGCCTCCGAAGCGATCCGCTCGAAGATGTCGTTGACGAAGCTGTTC 2769823 Query 1485649 ATGATCGACATCGATTTGTTGGAGATGCCCACGTCGGGGTGCACCTG 1485695 ||||| || | | ||||||||| ||| ||||| ||||| Sbjct 2769824 ATGATGCTGATGGCCCGACTCGAGATGCCCGTGTCTGGGTGGACCTG 2769870 >seq66 Length=1493390 Score = 100 bits (110), Expect = 5e-15 Identities = 117/157 (75%), Gaps = 6/157 (4%) Strand=Plus/Plus Query 429664 CCTACAACGCCGACTTTGACGGCGACGAGATGAACCTGCACGTGCCCCAGTC---GGAGA 429720 |||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct 637193 CCTACAACGCCGACTTTGACGGGGACGAGATGAACCTGCACGTGCCCCAGTCCATGGAGA 637252 Query 429721 TGGCACGCGCCGAAGTCGCCCACACCATGGGCGTGGCCCTCAAGGCCGTGTCGCCGCAGG 429780 | || ||||| || | | | |||| ||| ||| | || || | || ||| Sbjct 637253 ---CGCGGGCCGAGGTGACGGAGATCATGATGGTGCCCCGCCAGATGGTTACCCCACAGT 637309 Query 429781 CCAACAAGCCCATCATCGGGCTCGTGATGGACGCCCT 429817 ||||| |||| |||| || | ||| |||| |||| Sbjct 637310 CCAACCGGCCCGTCATGGGAATTGTGCAGGACTCCCT 637346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916058648899835