Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq19 89.7 7e-13 seq176 86.0 8e-12 seq107 86.0 8e-12 seq46 86.0 8e-12 seq18 86.0 8e-12 >seq19 Length=2857068 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 652010 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 651951 Query 8718 CCCGACGAGGAG 8729 |||| ||||||| Sbjct 651950 CCCGCCGAGGAG 651939 Score = 87.8 bits (96), Expect = 2e-12 Identities = 65/75 (87%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 ||||||||| |||||||||||| ||||| | | ||||| | | |||||||||||||||| Sbjct 652013 CAGTCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGA 651954 Query 11786 TTCCCCGACGAGGAG 11800 ||||||| ||||||| Sbjct 651953 TTCCCCGCCGAGGAG 651939 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 652178 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 652119 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 652118 CCCGCCGGGGAG 652107 Score = 82.4 bits (90), Expect = 1e-10 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 ||||||||| |||||||||||| ||||| | | ||||| | | |||||||||||||||| Sbjct 652181 CAGTCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGA 652122 Query 11786 TTCCCCGACGAGGAG 11800 ||||||| || |||| Sbjct 652121 TTCCCCGCCGGGGAG 652107 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 8655 TATTCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 8714 || |||||| |||||||||||||||||| | | ||||| | | |||| ||||||||||| Sbjct 833725 TAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGTCCGGGGTTCGA 833784 Query 8715 TTCCCCGACGAGGAG 8729 ||||||| || |||| Sbjct 833785 TTCCCCGCCGGGGAG 833799 >seq176 Length=618158 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| ||||||||||||||||||| ||| |||| | | ||||||||||||||||||| Sbjct 606530 TCCTCGGTAGTATAGTGGTTAGTATTTCCGACTGTAACTCAGGAGACCGGGGTTCGATTC 606589 Query 8718 CCCGACGAGGAG 8729 |||| | |||| Sbjct 606590 CCCGCGGGGGAG 606601 >seq107 Length=1005640 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 120861 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 120920 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 120921 CCCGCCGGGGAG 120932 >seq46 Length=1707116 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 139351 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 139410 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 139411 CCCGCCGGGGAG 139422 >seq18 Length=2396980 Score = 86.0 bits (94), Expect = 8e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| | | ||||| | | ||||||||||||||||||| Sbjct 524029 TCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTC 524088 Query 8718 CCCGACGAGGAG 8729 |||| || |||| Sbjct 524089 CCCGCCGGGGAG 524100 Score = 82.4 bits (90), Expect = 1e-10 Identities = 65/77 (84%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 11727 CAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGA 11785 || |||||| |||||||||||| ||||| | | ||||| | | |||||||||||||||| Sbjct 524026 CAATCCTCGGTAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGA 524085 Query 11786 TTCCCCGACGAGGAGGG 11802 ||||||| || |||||| Sbjct 524086 TTCCCCGCCGGGGAGGG 524102 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652830396611600