Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq176 104 2e-17 seq31 95.1 1e-14 >seq176 Length=618158 Score = 104 bits (114), Expect = 2e-17 Identities = 115/151 (76%), Gaps = 2/151 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || || ||| ||| |||||| |||||||||| Sbjct 484158 GGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTGCGACC-GTCCTCCAGCTGCTTGC 484100 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || ||||||||||||||||| || |||||||||||||| |||||| || Sbjct 484099 CGGCAAAGATCAGCCGCTGCTGGTCGGGCGGAATGCCTTCCTTGTCCTGGATCTTGGCCT 484040 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCAC 133612 | | | ||| | |||||| |||| || || Sbjct 484039 TAACATTCTCGATAGTGTCGCTGGGTTCGAC 484009 >seq31 Length=3510018 Score = 95.1 bits (104), Expect = 1e-14 Identities = 97/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 148850 CTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCC 148909 |||||| ||| | ||| |||| |||||| | |||||| || ||||| ||||| ||| Sbjct 1270739 CTCATCTGGGCTGGAGTATTCTATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCC 1270680 Query 148910 CACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCC 148969 || ||||| || || ||||||| ||| || || || ||||||||||||||||| || Sbjct 1270679 CAGGTTCTGCTGGTTACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACC 1270620 Query 148970 AGTTTCC 148976 ||| ||| Sbjct 1270619 AGTCTCC 1270613 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 148850 CTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCC 148909 |||||| ||| | ||| || | |||||| | |||||| || ||||| ||||| ||| Sbjct 1271416 CTCATCTGGGCTGGAGTATTCGATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCC 1271357 Query 148910 CACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCC 148969 || ||||| || || ||||||| ||| || || || ||||||||||||||||| || Sbjct 1271356 CAGGTTCTGCTGGTTACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACC 1271297 Query 148970 AGTTTCC 148976 ||| ||| Sbjct 1271296 AGTCTCC 1271290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483410134528600