Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq200 95.1 4e-16 seq5 93.3 1e-15 seq50 91.5 5e-15 seq10 91.5 5e-15 >seq200 Length=519655 Score = 95.1 bits (104), Expect = 4e-16 Identities = 61/66 (92%), Gaps = 2/66 (3%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA-- 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 310001 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAAAT 310060 Query 2827 CCCCGG 2832 |||||| Sbjct 310061 CCCCGG 310066 >seq5 Length=4025673 Score = 93.3 bits (102), Expect = 1e-15 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| | |||||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 3287144 GGCCGGAGTAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAAT 3287085 Query 2828 CCCGGG 2833 |||||| Sbjct 3287084 CCCGGG 3287079 Score = 93.3 bits (102), Expect = 1e-15 Identities = 60/66 (91%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| | |||||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 3293352 GGCCGGAGTAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAAT 3293293 Query 2828 CCCGGG 2833 |||||| Sbjct 3293292 CCCGGG 3293287 Score = 87.8 bits (96), Expect = 6e-14 Identities = 59/66 (89%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| | | |||||||||||||||||| | ||||||||||||| |||||||||||||||| Sbjct 3289610 GGCCGGAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAAT 3289551 Query 2828 CCCGGG 2833 |||||| Sbjct 3289550 CCCGGG 3289545 Score = 87.8 bits (96), Expect = 6e-14 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 2763 TTTAT-GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 ||||| ||| | |||||||||||||||||||| | ||||||||||||| ||||||||||| Sbjct 3290739 TTTATCGGCCGGAGTAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGG 3290680 Query 2822 TTCAA 2826 ||||| Sbjct 3290679 TTCAA 3290675 Score = 87.8 bits (96), Expect = 6e-14 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| | ||||||||||||| |||||||||||||||| | Sbjct 3293742 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATC 3293683 Query 2829 CCG 2831 ||| Sbjct 3293682 CCG 3293680 >seq50 Length=3751176 Score = 91.5 bits (100), Expect = 5e-15 Identities = 55/58 (95%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 1008556 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 1008499 >seq10 Length=4163896 Score = 91.5 bits (100), Expect = 5e-15 Identities = 59/65 (91%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| | ||||||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 535384 GCCGAAATGGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 535443 Query 2829 CCGGG 2833 || || Sbjct 535444 CCTGG 535448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849294028425