Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq40 145 1e-28 seq3 143 4e-28 seq181 127 3e-23 seq13 118 2e-20 seq31 113 6e-19 seq66 111 2e-18 seq11 100 4e-15 seq62 93.3 6e-13 >seq40 Length=2006373 Score = 145 bits (160), Expect = 1e-28 Identities = 172/232 (74%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | ||||||||||||||| |||| |||| |||| | || Sbjct 392425 ATCTACAAGGTGATGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCAGCCGTGCC 392372 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| |||| ||||||| | ||||||| | Sbjct 392371 ATGAGCATCATGAACAGCTTCGTCAACGACATCTTCGAGCGCATCGCCGCCGAGGCTTCT 392312 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||| |||| | || ||||||| ||| ||| || |||||| | |||||||| || Sbjct 392311 CGCTTGGCCCACTACAACAAGAAGTCCACCATCACCAGCCGCGAGGTGCAGACCGCTGTC 392252 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 ||||| || ||| ||| || ||||||| |||||||||| ||| ||||||| Sbjct 392251 CGCCTCCTCCTGCCCGGTGAGCTGGCCAAGCACGCCGTCAGCGAAGGCACCA 392200 >seq3 Length=4565964 Score = 143 bits (158), Expect = 4e-28 Identities = 220/308 (71%), Gaps = 7/308 (2%) Strand=Plus/Minus Query 1455776 ATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACCT 1455835 || ||||| |||||| |||||||||||||| || || ||||| | |||||||| || || Sbjct 1995859 ATCTGGGAGATGTAC-AAAAAGGCCGAGGCGTCTTTCTGGACAGTAGAGGAGGTTGATCT 1995801 Query 1455836 CGGCGCCGAC--ACGGTCCACTGGGTGTCGCTGAGCGACGACGAGCGCCATTTCATCAAG 1455893 | | || || | |||||| ||| | | || ||| || |||||| | Sbjct 1995800 CTCCAAGGATCTACCGG--ACTGGGAAATGCTCAAGAAGGAGGAGAAACACTTCATCTCG 1995743 Query 1455894 CACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGCCG 1455953 || ||||| ||||| ||| |||||||| || |||||||| |||||| ||| | || Sbjct 1995742 CATGTCCTGGCCTTCTTT-GCCGCCAGTGACGGCATCGTCAATGAGAACTTGGTGGAGCG 1995684 Query 1455954 CTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCCAT 1456013 ||| | | ||||| || |||| ||||| || | || || || |||||||| ||||| Sbjct 1995683 CTTCAGCCAGGAGGTGCAGGTGCCCGAGGCCCGCTGCTTCTATGGCTTCCAGATAGCCAT 1995624 Query 1456014 CGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCGGT 1456073 ||| ||||||||||| || | ||| | || |||||||||||| || |||||| | Sbjct 1995623 CGAGAACATCCACTCAGAGATGTACAGCTTGCTTATCGACACCTACATCCGGGACCCAGA 1995564 Query 1456074 CGAGAAGG 1456081 ||| |||| Sbjct 1995563 CGA-AAGG 1995557 >seq181 Length=879208 Score = 127 bits (140), Expect = 3e-23 Identities = 168/232 (72%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | ||||||||||||||| |||| |||| |||| | || Sbjct 410933 ATCTACAAGGTGATGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCAGCCGTGCC 410986 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| | || ||||||| | ||||||| Sbjct 410987 ATGAGCATCATGAACAGCTTCGTCAACGACATCTTTGAGCGCATCGCCGCCGAGGCTTCC 411046 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 ||| |||| | || ||||||| ||| ||| || || ||| | |||||||| || Sbjct 411047 CGCTTGGCTCACTACAACAAGAAGTCCACCATCACCAGCCGTGAGGTGCAGACCGCGGTC 411106 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || || || ||| ||| || ||||||| |||||||||| ||| ||||||| Sbjct 411107 CGTCTCCTCCTGCCCGGTGAGCTGGCCAAGCACGCCGTCAGCGAAGGCACCA 411158 >seq13 Length=2809586 Score = 118 bits (130), Expect = 2e-20 Identities = 165/230 (72%), Gaps = 6/230 (3%) Strand=Plus/Plus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | ||||||||||||||| |||| |||| |||| | || Sbjct 2054298 ATCTACAAGGTGATGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCAGCCGTGCC 2054351 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || ||||||||||| | || ||||||| | || || | Sbjct 2054352 ATGAGCATCATGAACAGCTTCGTCAACGACATCTTTGAGCGCATCGCTGCTGAAGCTTCT 2054411 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | || ||||||| ||| ||| || || ||| | |||||||| || Sbjct 2054412 CGTCTGGCCCACTACAACAAGAAGTCCACCATCACCAGCCGTGAGGTGCAGACCGCAGTC 2054471 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || ||| || ||| ||| || ||||||| |||||||||| ||| ||||| Sbjct 2054472 CGTCTGCTCCTGCCCGGTGAGCTGGCCAAGCACGCCGTCAGCGAAGGCAC 2054521 >seq31 Length=3510018 Score = 113 bits (124), Expect = 6e-19 Identities = 169/239 (71%), Gaps = 6/239 (3%) Strand=Plus/Plus Query 261806 GGCGCCTTTGCCTGCTACCTGGAACCGTGGCACGCCGACCTCATCAACTGGCTGGACCTC 261865 || ||||||||| |||||||| || |||||||||||| || || | | |||||| | Sbjct 1269854 GGGGCCTTTGCCGTGTACCTGGAGCCCTGGCACGCCGACATCTTCGATTTCCTGGACTGC 1269913 Query 261866 AAAAAGAACCACGGCAAGGGAGGGGGAGAACCGGGCGCGCGCGATCTCTTTTACGGCCTG 261925 || |||||||||||||||| | ||| | ||| || || || ||||| |||| |||| Sbjct 1269914 AAGAAGAACCACGGCAAGGAA----GAGCAGCGG--GCCCGTGACCTCTTCTACGCCCTG 1269967 Query 261926 TGGACGTGCGACCTGTTTATGCGCCGCATGGTGACCGGCCGCGACTGGTCGCTCTTTTGC 261985 |||| |||||||| ||| | ||||| | || || || ||||||| || | ||| Sbjct 1269968 TGGATACCAGACCTGTTCATGAGGCGCATTGAGAACGACCAGGACTGGTGCCTGATGTGC 1270027 Query 261986 CCGTCCGAGGCGCCCGGCCTGCACGAATGCTATGGCGCGGCCTTTGACGCCCTCTATGA 262044 || |||| || || || ||| |||| ||| || |||||| ||||| || Sbjct 1270028 CCCAACGAGAGCCCAGGGTTGTCCGAGTGCTGGGGCAAGGAGTTTGACAAACTCTACGA 1270086 >seq66 Length=1493390 Score = 111 bits (122), Expect = 2e-18 Identities = 119/155 (77%), Gaps = 3/155 (2%) Strand=Plus/Minus Query 1817479 AGGGCGTCCATGACCAGGCCGATGATGGGCTTGTTGGCCTGCGGCGACACGGTCTTGAGG 1817538 |||| |||| || | || |||| |||| ||||| ||| || | || ||| | || Sbjct 637346 AGGGAGTCCTGCACAATTCCCATGACGGGCCGGTTGGACTGTGGGGTAACCATCTGGCGG 637287 Query 1817539 GCCACGTTCATGGTGTGCGTCACCTCGGCGCGCGCGTCTCA--GACTGGGGCACATGGAG 1817596 | ||| ||||| | | |||||||||||| |||| || || ||||||||||| || || Sbjct 637286 GGCACCATCATGATCTCCGTCACCTCGGCCCGCGTCTC-CATGGACTGGGGCACGTGCAG 637228 Query 1817597 GTTCATCTCGTCGCCGTCAAAGTCGGCATTGTAGG 1817631 |||||||||||| |||||||||||||| ||||||| Sbjct 637227 GTTCATCTCGTCCCCGTCAAAGTCGGCGTTGTAGG 637193 Score = 87.8 bits (96), Expect = 3e-11 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 1816167 CGGCGGTCTTGACGGCCGTGTCGACCAGGCCCTCGCGGCCGCCGATCATGTGCAAAAACA 1816226 |||| ||||||||||| ||||||| ||| ||||| |||||||| || ||| || |||| Sbjct 641514 CGGCAGTCTTGACGGCGGTGTCGATCAGACCCTCTCGGCCGCCCATGGCGTGGAAGAACA 641455 Query 1816227 TCTCGCGCGAGTTGAGGCCGCGCTCGTACGAGTTGCGCACAAAGCCGCGGCTCTCGGG 1816284 |||| | | | |||||| | ||| ||||| ||||||||| | ||||||||| Sbjct 641454 TCTCTGAGGGGGTCAGGCCGGCCAGGTAGGAGTTCTCCACAAAGCCTCTGCTCTCGGG 641397 >seq11 Length=3137503 Score = 100 bits (110), Expect = 4e-15 Identities = 161/230 (70%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 724911 ATCTACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCC 724970 |||||||||||| | ||||||||||| || ||| | ||| ||| | | || Sbjct 1687900 ATCTACAAGGTGATGAAGCAGGTGCATCCTGACACC-----GGCAT-CTCAAGCCGTGCC 1687847 Query 724971 ATGTCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGT 725030 ||| ||||||||| || || |||||||| |||| ||||||| |||| || Sbjct 1687846 ATGAGTATCATGAACAGCTTCGTGAACGACATCTTCGAGCGCATCGCTGCCGAAGCTTCA 1687787 Query 725031 CGCCTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTG 725090 || ||||| | || ||||||| ||| ||| || || ||| |||||||||| || Sbjct 1687786 CGTCTGGCCCACTACAACAAGAAGTCCACCATCACCAGCCGTGAGGTCCAGACCGCTGTC 1687727 Query 725091 CGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140 || || || ||| ||| || ||||||| |||||||||| || ||||| Sbjct 1687726 CGTCTCCTCCTGCCCGGTGAGCTGGCCAAGCACGCCGTCAGTGAAGGCAC 1687677 >seq62 Length=3594205 Score = 93.3 bits (102), Expect = 6e-13 Identities = 120/166 (72%), Gaps = 0/166 (0%) Strand=Plus/Minus Query 724977 ATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTG 725036 ||||||||| || ||||||||||| |||| || |||| | ||||| ||| || Sbjct 2769828 ATCATGAACAGCTTCGTCAACGACATCTTCGAGCGGATCGCTTCGGAGGCTTCCCGCTTG 2769769 Query 725037 GCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTG 725096 || | | ||||||| || ||| ||| || ||| | ||||| ||||| || || Sbjct 2769768 GCCCAGTACAACAAGAAGTCTACCATCAGCAGCCGAGAGGTGCAGACGGCCGTTCGTCTC 2769709 Query 725097 ATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142 || ||| |||||||||||||| |||||| ||| ||| ||||||| Sbjct 2769708 CTCCTGCCCGGCGAACTGGCCAAGCACGCAGTCAGCGAAGGCACCA 2769663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177640962505930