Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq176 105 6e-18 seq82 82.4 7e-11 >seq176 Length=618158 Score = 105 bits (116), Expect = 6e-18 Identities = 132/181 (73%), Gaps = 0/181 (0%) Strand=Plus/Minus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 || || || | ||||| ||||| || | || |||||| || |||||||| || | | Sbjct 484187 CCGCCCCGCAGCCTCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 484128 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| ||||||||||| || ||||| |||| |||||||||||| | ||| Sbjct 484127 AGGGTGCGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCGGGCGGA 484068 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || ||||||||| |||||| ||| | | | | | |||||||| | ||| ||| Sbjct 484067 ATGCCTTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATAGTGTCGCTGGGTTCGACC 484008 Query 35690 T 35690 | Sbjct 484007 T 484007 >seq82 Length=1221020 Score = 82.4 bits (90), Expect = 7e-11 Identities = 87/112 (78%), Gaps = 2/112 (2%) Strand=Plus/Minus Query 44306 AGGATGTATGTGGTCCATTTGCGGTGTCCACGA-CAGGGCGTGGCGAGAGCTACCCATCT 44364 ||| |||||||||||||| || || |||| || |||||| ||| |||| ||| ||| Sbjct 692695 AGGTTGTATGTGGTCCATCTGTGGCATCCATGATCAGGGCTGGGC-AGAGAGACCTGTCT 692637 Query 44365 ACGGCAAAGTGCGCTACATGAACTACAACGGTTGCGTCAGAAAGTTTGATGT 44416 ||||| | |||||||||||||||||||||||| | |||||||| || Sbjct 692636 TTGGCAAGATCCGCTACATGAACTACAACGGTTGCAAGCGTAAGTTTGACGT 692585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450783654366200