Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq47 170 6e-37 seq35 93.3 1e-13 seq880 87.8 5e-12 seq103 86.0 2e-11 >seq47 Length=1833283 Score = 170 bits (188), Expect = 6e-37 Identities = 712/1117 (64%), Gaps = 14/1117 (1%) Strand=Plus/Minus Query 349531 ACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTT 349590 ||| || ||||| || ||||| || ||||||||||| | ||||| || ||| | Sbjct 1415547 ACCAGAGGAAATCAGCTCCATGGTCCTAACAAAAATGAAGGAGACAGCTGAGGCTTATCT 1415488 Query 349591 AGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCG 349650 || | | ||| | |||||||| || ||||| || || || || ||||| ||||| | Sbjct 1415487 TGGACAGAAAGTCAAGGATGCTGTCATCACTGTGCCGGCATACTTCAATGACTCCCAGAG 1415428 Query 349651 TTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGA 349710 || || || |||||||| | ||||| ||| | ||||| || || || || || || Sbjct 1415427 ACAGGCTACCAAGGATGCTGGGATGATTGCTGGGCTCAATGTCCTCAGGATCATCAACGA 1415368 Query 349711 ACCCACTGCTGCAGCAATTGCATATGGGCTTG---ATAAAATGAGTGACCAAGaaaaaaa 349767 ||| || || || || | || || || || | | ||| |||||| || || | Sbjct 1415367 ACCTACAGCAGCTGCCTTGGCCTACGGACTGGACAAGAAACTGAGTG---GGGAGAAGCA 1415311 Query 349768 TATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGA 349827 | | || || |||||| | || || || |||||||| || || | || | |||| || Sbjct 1415310 TGTCCTCATCTTTGATCTTGGGGGCGGCACTTTTGACGTGTCTGTCCTGGCTATTGAGGA 1415251 Query 349828 GGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGA 349887 || || ||||| ||| | || || |||||||| || || ||||| ||||| ||||| Sbjct 1415250 TGGCATGTTTGAGGTTCTGTCCACAGCGGGTGATACTCACCTGGGTGGGGAAGACTTTGA 1415191 Query 349888 TAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGG 349947 || || || || || |||| | ||||| || || ||| || || | | | Sbjct 1415190 CAACCGCCTGGTGAACCACCTTGTAGAGGAATTCAAACG-GAAG-TACAAGAAGGACTTG 1415133 Query 349948 AGA--TAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCC 350005 | | ||||| ||| | |||| || | || || ||| ||| || |||||| | || Sbjct 1415132 ACAACAAATCCAAGATCCTTGCGCCGATTGAGGACAGCGGCTGAGCGAGCTAAGAGGACC 1415073 Query 350006 TTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTC 350065 | || | || || | ||||| | || ||||| ||| || | || ||| Sbjct 1415072 CTGTCCAGCAGCACGCAGGCAAGCATTGAGGTGGACTCTCTCTTTGAGGGTATCGACTTC 1415013 Query 350066 TTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAG--AGCAA 350123 | ||| | | |||| || || |||||||| | ||| ||||| || | || Sbjct 1415012 TACACATGTGTCTCACGAGCCCGTTTTGAAGAGCTGTGTGCTGATCTGTTCCGTCAGTGC 1414953 Query 350124 CAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATG 350183 | || | |||||||| | | || ||||||||| | ||| | | || | | Sbjct 1414952 C--TGAACCCTGTGGAGAGGGCTTTGGTGGATGCAAAACTTGACAAGCACCTCATCAACG 1414895 Query 350184 AAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGT 350243 | || || || ||||| || || || || || || ||| | || || | | || | Sbjct 1414894 AGGTTGTGTTGGTTGGAGGCTCCACCCGAATCCCCAAAATCCAGAAGCTGTTGCAGGATT 1414835 Query 350244 TTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTG 350303 | | ||||| || |||| | || ||||||||||||||||| || || ||||| | Sbjct 1414834 TCCTCAATGGGAAGGAACTGAACCGCTCCATTAATCCAGATGAAGCAGTAGCCTATGGAG 1414775 Query 350304 CTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAATTGATGATCTATTAC 350363 | |||||||||||| | || || ||| | ||||||| | | | ||| | | | Sbjct 1414774 CCGCTGTTCAGGCAGCCATCTTGAGTGGCGACCAGAGTTCAGAGGTAAAGGATGTTCTTC 1414715 Query 350364 TACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGTGAAGTAATGACTGTTC 350423 | | ||||| |||| | || ||||| | || || |||||| | |||||| Sbjct 1414714 TTGTGGATGTTGCTCCTTTGTCACTTGGCATTGAGACAGCTGGTGGCATCATGACTAAAT 1414655 Query 350424 TTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACTTTTTCTACATTTGCAG 350483 | || |||| | | || || |||| ||| | ||||| | || | | | | Sbjct 1414654 TGATCGAGCGAAACACCCGCATCCCCACCAAAACATCCAAGACTTTCACCACCTATTCCG 1414595 Query 350484 ATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGTGCTCGCACTAAAGATA 350543 |||||||||| || || || | || || ||||| || || | || || ||||| | Sbjct 1414594 ATAATCAGCCTGCTGTTACCGTGCAGGTTTTTGAGGGAGAGAGAGCCATGACAAAAGACA 1414535 Query 350544 ATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTC 350603 | | ||||| | |||| || | || || | ||| | || || || Sbjct 1414534 ACCACTGTCTTGGTGTATTTGAACTTTCGGGCATCCCTCTTGCTCCTCGTGGTGTACCCA 1414475 Query 350604 AGATTGAAGTCTCTTTCGATATTGATTCAAATGGTAT 350640 |||| || ||| | || ||||||||| | |||||||| Sbjct 1414474 AGATCGAGGTCACCTTGGATATTGATGCTAATGGTAT 1414438 >seq35 Length=1863366 Score = 93.3 bits (102), Expect = 1e-13 Identities = 69/77 (90%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||||| ||| |||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct 1031891 GGGGGAT-TAGCTCAAGTGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACCGGGATCGAT 1031949 Query 235949 ACCCAGCATC-TCCATA 235964 |||||| ||| |||||| Sbjct 1031950 ACCCAG-ATCTTCCATA 1031965 Score = 87.8 bits (96), Expect = 5e-12 Identities = 68/77 (88%), Gaps = 3/77 (4%) Strand=Plus/Plus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||||| ||| |||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct 1035633 GGGGGAT-TAGCTCAAGTGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACCGGGATCGAT 1035691 Query 235949 ACCCAGCATC-TCCATA 235964 |||| | ||| |||||| Sbjct 1035692 ACCC-GGATCTTCCATA 1035707 Score = 84.2 bits (92), Expect = 7e-11 Identities = 59/66 (89%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 235887 TAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCA 235946 ||||||||| ||| |||| ||||||| ||||||||| |||||||||||||||||||||| Sbjct 1045183 TAGGGGGAT-TAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACCGGGATCG 1045125 Query 235947 AAACCC 235952 | |||| Sbjct 1045124 ATACCC 1045119 >seq880 Length=3597 Score = 87.8 bits (96), Expect = 5e-12 Identities = 69/79 (87%), Gaps = 3/79 (4%) Strand=Plus/Plus Query 235889 GGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCAAA 235948 ||||||| ||| |||| ||||||| |||||||||||||||||||||||||||||||| | Sbjct 1835 GGGGGAT-TAGCTCAAGTGGTAGAGCGCTCGCTTTGCATGCGAGAGGTACCGGGATCGAT 1893 Query 235949 ACCCAGCATC-TCCATACA 235966 |||| | ||| ||||| || Sbjct 1894 ACCC-GGATCTTCCATGCA 1911 Score = 84.2 bits (92), Expect = 7e-11 Identities = 59/66 (89%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 235887 TAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATCA 235946 ||||||||| ||| |||| ||||||| ||||||||| |||||||||||||||||||||| Sbjct 3546 TAGGGGGAT-TAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGTACCGGGATCG 3488 Query 235947 AAACCC 235952 | |||| Sbjct 3487 ATACCC 3482 >seq103 Length=1296173 Score = 86.0 bits (94), Expect = 2e-11 Identities = 66/77 (86%), Gaps = 1/77 (1%) Strand=Plus/Minus Query 235886 ATAGGGGGATGTAGATCAATTGGTAGATCGCTCGCTTTGCATGCGAGAGGTACCGGGATC 235945 |||||||||| ||| |||| ||||||| ||||||||| |||||||||||| ||||||||| Sbjct 1019803 ATAGGGGGAT-TAGCTCAAGTGGTAGAGCGCTCGCTTAGCATGCGAGAGGCACCGGGATC 1019745 Query 235946 AAAACCCAGCATCTCCA 235962 | |||| | |||||| Sbjct 1019744 GATACCCGGATTCTCCA 1019728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1515220133942295