Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq31 123 3e-23 >seq31 Length=3510018 Score = 123 bits (136), Expect = 3e-23 Identities = 146/195 (75%), Gaps = 2/195 (1%) Strand=Plus/Minus Query 79318 TCGGGCAGGCCCGGGCACTCGTGCGGGCACATCAGGTGCCAGTCCTCGTCCTTCTCAACC 79377 |||| || || |||| ||||| |||||||||||| |||||||| ||| ||||||| Sbjct 1270053 TCGGACAACCCTGGGCTCTCGTTGGGGCACATCAGGCACCAGTCCTGGTCGTTCTCAATG 1269994 Query 79378 TTCTCCATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCC 79437 | |||||| ||||| || ||||||||||| ||||||||| ||| ||| ||| Sbjct 1269993 CGCCTCATGAACAGGTCTGGTATCCACAGGGCGTAGAAGAGGTCACGGGCCCGCTGCTCT 1269934 Query 79438 TCGTCGCCCTGGTTC-AGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTC 79496 || | ||| |||||| |||| || || || || | ||||||||||||||| ||||| Sbjct 1269933 TCCTTGCCGTGGTTCTTCTTGCAG-TCCAGGAAATCGAAGATGTCGGCGTGCCAGGGCTC 1269875 Query 79497 CAGATAGATGGCGAA 79511 ||| || | ||| || Sbjct 1269874 CAGGTACACGGCAAA 1269860 Score = 100 bits (110), Expect = 3e-16 Identities = 124/170 (73%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 79080 CTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCC 79139 ||| || ||||| || |||||||| || ||||||| ||| ||||||||||||| Sbjct 1271416 CTCATCTGGGCTGGAGTATTCGATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCC 1271357 Query 79140 GATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCC 79199 | ||||| |||||| ||||| |||||||||| || ||||| ||||||||| || || Sbjct 1271356 CAGGTTCTGCTGGTTACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACC 1271297 Query 79200 GGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCCCGGA 79249 ||||| ||| || | || | | | ||||| || | |||||| || Sbjct 1271296 AGTCTCCGTTTGAGCCTGTATAATGGCCTGCCAGAGGTACTGGGCCCTGA 1271247 Score = 95.1 bits (104), Expect = 1e-14 Identities = 134/186 (72%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 19493 TTCGCCATCTACCTCGAGCCATGGCACGCGGACGTCATGGATTTCCTCGAACTGCGCCT- 19551 || ||| | ||||| ||||| |||||||| ||| || | |||||||| || |||| Sbjct 1269860 TTTGCCGTGTACCTGGAGCCCTGGCACGCCGACATCTTCGATTTCCTGGA-CTGCAAGAA 1269918 Query 19552 GAACCAGGGTGACGAGGAGATGCGCTGTCGCGACCTCTTCACGGCCTTGTGGATTCCGGA 19611 |||||| || | || ||| ||| || ||||||||| ||| ||||||| || || Sbjct 1269919 GAACCACGGCAAGGAAGAGCAGCGGGCCCGTGACCTCTTCTACGCCCTGTGGATACCAGA 1269978 Query 19612 CCTATTCATGGAGAAGGTTGAGAAGGACGAAGAATGGCACCTGATGTGCCCGCACGAATG 19671 ||| |||||| | ||||||| ||| | || ||| |||||||||||| |||| | Sbjct 1269979 CCTGTTCATGAGGCGCATTGAGAACGACCAGGACTGGTGCCTGATGTGCCCCAACGAGAG 1270038 Query 19672 CCCTGG 19677 ||| || Sbjct 1270039 CCCAGG 1270044 Score = 93.3 bits (102), Expect = 5e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 79080 CTCGTCCGGGCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCC 79139 ||| || ||||| || || ||||| || ||||||| ||| ||||||||||||| Sbjct 1270739 CTCATCTGGGCTGGAGTATTCTATGATCTCCGTGCACAGGTTACTGCACTTGATGGTGCC 1270680 Query 79140 GATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCACATGTACGGCGTCCC 79199 | ||||| |||||| ||||| |||||||||| || ||||| ||||||||| || || Sbjct 1270679 CAGGTTCTGCTGGTTACTCTTGCCGTTACAGGCATCTTTGTACAGCATGTACGGGGTACC 1270620 Query 79200 GGTCTC 79205 ||||| Sbjct 1270619 AGTCTC 1270614 Score = 91.5 bits (100), Expect = 2e-13 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 20089 GCGCCACCGGCCGATCGCGATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCTCGG 20148 ||| ||||| || || | ||||| || |||||||||||||||| |||||| | | | | Sbjct 1275438 GCGTCACCGCCCCATTGGCATCGGGGTGCAGGGCCTGGCCGACGCTTTCATCAAGATGCG 1275497 Query 20149 CCTCTCATTCGACGATCCCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTA 20208 | || | || || ||| |||| | ||||||||| ||||| ||| || | || Sbjct 1275498 CTTCCCCTTTGAGAGCCCCGAGGCCCAGAAGCTCAACATCCAGATCTTTGAGACCATCTA 1275557 Query 20209 CCACGCGGCCCTCCTGGAATCGTGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTT 20268 | |||| ||||| || | ||||| || ||||| ||| | || || |||||||| | Sbjct 1275558 CTACGCCGCCCTGAGGGCAAGCTGCGATCTGGCCAAGGAGCAGGGACCCTACGAGACCTA 1275617 Query 20269 CAAGGGGTCGCCCGC 20283 | |||| || || || Sbjct 1275618 CGAGGGCTCCCCGGC 1275632 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 2/205 (1%) Strand=Plus/Minus Query 78721 GCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCATGACTCG 78780 ||||| || |||| | | |||||||| | ||||| ||||||||| || ||||| | Sbjct 1275632 GCCGGGGAGCCCTCGTAGGTCTCGTAGGGTCCCTGCTCCTTGGCCAGATCGCAGCTTGCC 1275573 Query 78781 AGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGT- 78839 |||||| |||| ||| | | ||| ||||| ||||||||| | |||| || Sbjct 1275572 CTCAGGGCGGCGTAGTAGATGGTCTCAAAGATCTGGATGTTGAGCTTCTGGGCCTCGGGG 1275513 Query 78840 CTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGC 78899 ||| || || | | || | | | ||||| | |||||||||||||| || ||||| | Sbjct 1275512 CTC-TCAAAGGGGAAGCGCATCTTGATGAAAGCGTCGGCCAGGCCCTGCACCCCGATGCC 1275454 Query 78900 GATCGGTCGGTGGCGCATGTTGCTC 78924 || || ||||| ||| ||||||| Sbjct 1275453 AATGGGGCGGTGACGCCGGTTGCTC 1275429 Score = 84.2 bits (92), Expect = 2e-11 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 19253 AGCTGTTTCCTAGTGGCTATGAAGGATGACAGCATTGAGGGCATCTACGAGACGCTCAAG 19312 ||||||||||| || | |||| || || ||||||||||| |||||||| || || ||| Sbjct 1268499 AGCTGTTTCCTGCTGACAATGAGCGACGATAGCATTGAGGGGATCTACGACACCCTGAAG 1268558 Query 19313 GAGTGCGCGCACATCTCCAAGTGGTCCGGGGGTATCGGGATCCAC-TGCTCGAATATCCG 19371 ||||||||| ||||||||| | |||| || || || || || ||| | || ||||| Sbjct 1268559 CAGTGCGCGCTGATCTCCAAGACGGCCGGAGGCATTGGCGTCAACGTGCAC-AAGATCCG 1268617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548512698171600