Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq31 105 7e-18 seq104 89.7 6e-13 >seq31 Length=3510018 Score = 105 bits (116), Expect = 7e-18 Identities = 145/197 (74%), Gaps = 12/197 (6%) Strand=Plus/Plus Query 53564 GGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGAGTTTCTCGAGCTG 53623 ||| | || ||| | ||||| ||||| |||||||||||||| | || || || || ||| Sbjct 1269854 GGGGCCTTTGCCGTGTACCTGGAGCCCTGGCACGCCGACATCTTCGATTTCCTGGA-CTG 1269912 Query 53624 CGTCT-GAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTT-TACAGCTCTGTGGA 53681 | ||| || || | |||||| ||| ||||||||| || ||| || ||||||| Sbjct 1269913 CAAGAAGAACCACGGCAAGGAAGAGCAGCGGGCCCGTGACCTCTTCTAC-GCCCTGTGGA 1269971 Query 53682 TTCCGGACCTCTTCATGCAAAAGGTG----GAGAAGGACGAGGAGTGGTACCTGATGTGC 53737 | || ||||| |||||| ||| | ||||| ||| |||| |||| |||||||||| Sbjct 1269972 TACCAGACCTGTTCATG----AGGCGCATTGAGAACGACCAGGACTGGTGCCTGATGTGC 1270027 Query 53738 CCGAACGAGTGCCCCGG 53754 || |||||| |||| || Sbjct 1270028 CCCAACGAGAGCCCAGG 1270044 >seq104 Length=1008906 Score = 89.7 bits (98), Expect = 6e-13 Identities = 102/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 152027 GCGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACT 152086 ||||||||||||| || | |||||| || || ||||| || |||||| || ||||||| Sbjct 451294 GCGTGAAGATGTAACGCGGGCTGGCAGCGTCTTTGCCGCCGTACAGCCGTGTACCAAACT 451353 Query 152087 GTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCA 152146 | || ||||| | ||| || ||||||||| ||| ||| | ||||| ||||| || | Sbjct 451354 GACCGATGGGCTGCAAGAGATTCAGGTTGTTGCTGCCTACGTAGTTCTGTGCCAAGTTGA 451413 Query 152147 CAATCGTGCCCTGCAGA 152163 || |||| | |||| Sbjct 451414 TGATGGTGCTCATCAGA 451430 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| |||||||| | ||| ||||| || ||||| || || || ||||| || || Sbjct 451296 GTGAAGATGTAACGCGGGCTGGCAGCGTCTTTGCCGCCGTACAGCCGTGTACCAAACTGA 451355 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGA 117422 || | |||| |||||| |||||||||||| ||| || |||| || |||||||||| Sbjct 451356 CCGATGGGCTGCAAGAGATTCAGGTTGTTGCTGCCTACGTAGTTCTGTGCCAAGTTGA 451413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547203927047000