Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq176 114 3e-20 seq215 95.1 3e-14 >seq176 Length=618158 Score = 114 bits (126), Expect = 3e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 || || ||||| || ||||| || ||||| || || |||| ||||| || | || || Sbjct 484181 CGCAGCCTCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGACAGGGTG 484122 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || |||||||| || || ||||| || || || |||||||||||||| ||| Sbjct 484121 CGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCGGGCGGAATGCCT 484062 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTC 225653 |||||||| |||||||| ||| ||| ||||| ||||| Sbjct 484061 TCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATAGTGTC 484021 >seq215 Length=448669 Score = 95.1 bits (104), Expect = 3e-14 Identities = 99/129 (77%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 7735 TTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCT 7794 |||||||| ||||| ||||| || ||||||||||||| |||||||||| | | | Sbjct 302532 TTGGTAAGGTTCTTCGCGTTGCTTCGAATTAAACCACATGTTCCACCGCTTGTGCGGGTT 302473 Query 7795 TCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT-ATTTACG 7853 ||||| || |||||||||||| |||||| |||| | | |||| ||| | || ||| Sbjct 302472 CCCGTCTATTCCTTTGAGTTTTACACTTGCGTGCGTACTCCCCAGGCGGAGTGCTTAACG 302413 Query 7854 CGTTAGCTT 7862 ||||||||| Sbjct 302412 CGTTAGCTT 302404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192504232024910