Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3 127 2e-24 >seq3 Length=4565964 Score = 127 bits (140), Expect = 2e-24 Identities = 199/285 (70%), Gaps = 0/285 (0%) Strand=Plus/Plus Query 4808 TGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTAT 4867 |||||| | || || ||||| || || | ||| ||||| || || || || || || || Sbjct 1995566 TGGGTCCCGGATGTAGGTGTCGATAAGCAAGCTGTACATCTCTGAGTGGATGTTCTCGAT 1995625 Query 4868 AGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCT 4927 || ||||| || || || ||||| | || || | || || || || | | || | Sbjct 1995626 GGCTATCTGGAAGCCATAGAAGCAGCGGGCCTCGGGCACCTGCACCTCCTGGCTGAAGCG 1995685 Query 4928 TTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGA 4987 || || ||||| || || || || ||||||||||| ||||| || |||| ||||| || Sbjct 1995686 CTCCACCAAGTTCTCATTGACGATGCCGTCACTGGCGGCAAAGAAGGCCAGGACATGCGA 1995745 Query 4988 TATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATC 5047 || |||| | || || ||| || ||| ||||| || | ||| || | | ||| Sbjct 1995746 GATGAAGTGTTTCTCCTCCTTCTTGAGCATTTCCCAGTCCGGTAGATCCTTGGAGAGATC 1995805 Query 5048 AACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 ||| || || || ||||| || ||||| || || ||||||||||| Sbjct 1995806 AACCTCCTCTACTGTCCAGAAAGACGCCTCGGCCTTTTTGTACAT 1995850 Score = 86.0 bits (94), Expect = 5e-12 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 ||||| | ||| ||||| ||||||||||| || | || ||||||| || ||||| || Sbjct 1994783 TCGTCGCGGCTGATCAGCTCGTTAGAAAAGGTCAGGCCATGCATTAATCCCCTCTTCTTC 1994842 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 | ||| || || | |||||||| || || ||||| ||||| || ||||| || || || Sbjct 1994843 AACCAGAAGATGGAAGCAAATGAACCCGAGAAGAAAATGCCCTCCACGGCAGCGAAGGCC 1994902 Query 4692 AC 4693 || Sbjct 1994903 AC 1994904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427040413762745