Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq176 122 2e-22 seq107 86.0 1e-11 seq46 86.0 1e-11 seq19 86.0 1e-11 seq18 86.0 1e-11 seq96 84.2 5e-11 >seq176 Length=618158 Score = 122 bits (134), Expect = 2e-22 Identities = 127/167 (76%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || ||||| | || ||||| || | ||| || || |||||||||||||||| Sbjct 484187 CCGCCCCGCAGCCTCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 484128 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || || ||||||||||||| || || ||||| |||| Sbjct 484127 AGGGTGCGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCGGGCGGA 484068 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039 || || |||||||| |||||||| || || || | ||||||||||| Sbjct 484067 ATGCCTTCCTTGTCCTGGATCTTGGCCTTAACATTCTCGATAGTGTC 484021 >seq107 Length=1005640 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 120868 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 120924 >seq46 Length=1707116 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 139358 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 139414 >seq19 Length=2857068 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 652003 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 651947 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 652171 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 652115 Score = 84.2 bits (92), Expect = 5e-11 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCC 168809 ||| ||||||||||||||||||| ||||||| |||||||||||||||| ||||||| Sbjct 653490 TAGCATAGTGGTTAGTATCCCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCC 653435 >seq18 Length=2396980 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 168754 TAGTATAGTGGTTAGTATCCCTGCCTGTCACGCAGGAGACCGGGGTTCAATTCCCCG 168810 ||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||| Sbjct 524036 TAGTATAGTGGTTAGTATCTCTGACTGTCACTCAGGAGACCGGGGTTCGATTCCCCG 524092 >seq96 Length=2115401 Score = 84.2 bits (92), Expect = 5e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||||||||||||||| || | || |||||||| ||||| || || || |||||||||| Sbjct 629321 CTTTTTGGATGTTGTAATCTGACAGTGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGA 629262 Query 282970 TCAAACGTTGTTGGTC 282985 ||||||| || ||||| Sbjct 629261 TCAAACGCTGCTGGTC 629246 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046715528974310