Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acanthaster_20planci_20[genbank_20GCA_5F001949145.1_202016-12-20] 1,765 sequences; 383,843,944 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq176 109 4e-19 seq96 84.2 2e-11 >seq176 Length=618158 Score = 109 bits (120), Expect = 4e-19 Identities = 135/182 (74%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 44111 CCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCG 44170 || || | ||| |||| ||||||||| || ||| |||||| ||||||||||| || | Sbjct 484187 CCGCCCCGCAGCCTCAGCACCAGGTGCAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAC 484128 Query 44171 AGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGC 44230 || ||| |||| ||||||||||| ||||||||||||| |||||||| || | || Sbjct 484127 AGGGTGCGACCGTCCTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCGGGCGGA 484068 Query 44231 ACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCAC 44289 | |||||||| ||| ||||| || | || ||| | || |||||| || ||| || Sbjct 484067 ATGCCTTCCTTGTCCTGGATCTT-GGCCTTAACATTCTCGATAGTGTCGCTGGGTTCGAC 484009 Query 44290 CT 44291 || Sbjct 484008 CT 484007 >seq96 Length=2115401 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 44150 TTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATC 44209 ||||||||||||||||| | ||| ||| |||| || |||||||| |||||||||||| Sbjct 629319 TTTTGGATGTTGTAATCTGACAGTGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATC 629260 Query 44210 AAACGCTGCTGATC 44223 ||||||||||| || Sbjct 629259 AAACGCTGCTGGTC 629246 Score = 82.4 bits (90), Expect = 5e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 44232 CACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCT 44291 |||| ||||| || |||||| ||| | | | |||||||||| | ||| |||| Sbjct 628031 CACCCTCCTTGTCTTGTATCTTGGCCTTGACATTCTCAATGGTGTCGGAAGGTTCTACCT 627972 Query 44292 CCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||| |||||| ||||| ||||| ||||||||||| ||||| |||||| || Sbjct 627971 CCAACGTAATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATGGTG 627922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359982656269005