Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq37 84.2 3e-11 >seq37 Length=1179958 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| || | | ||||| || | ||| ||||| ||| || || || || || Sbjct 895231 CCACCTCTCAGGCGAAGAACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAGTCGCT 895289 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || |||| || ||| || | ||||||||| || ||||||| || |||||||| || || Sbjct 895290 CAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGATCTGGTGG 895349 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||| ||||||||||| Sbjct 895350 GATTCCCTCTTTATCTTG 895367 Score = 84.2 bits (92), Expect = 3e-11 Identities = 103/138 (75%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109 |||||||| || | | ||||| || | ||| ||||| ||| || || || || || Sbjct 895459 CCACCTCTCAGGCGAAGAACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAGTCGCT 895517 Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169 || |||| || ||| || | ||||||||| || ||||||| || |||||||| || || Sbjct 895518 CAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGATCAGGTGG 895577 Query 146170 AATTCCTTCTTTATCTTG 146187 ||||||||||| ||||| Sbjct 895578 GATTCCTTCTTTGTCTTG 895595 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 743503899032320