Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_002687.1 Length=335593 Score E Sequences producing significant alignments: (Bits) Value seq283 91.5 3e-13 >seq283 Length=477172 Score = 91.5 bits (100), Expect = 3e-13 Identities = 119/165 (72%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 248530 GCCATCGCCCAGAAAGTTATTTCGGGCGTCTACACCGGAGTAACAACGACAGAACTGGAC 248589 || ||| || ||||||||||||| || ||||| | ||||| || || || |||||| Sbjct 158295 GCTATCACCAAGAAAGTTATTTCTGGTATCTACCCTGGAGTGCAGACAACTGAGCTGGAC 158236 Query 248590 ACCTTAGCTGCGGAGACGGCGGCGTACATGGCGATTGCACACCCCGACTACTCGCTGCTG 248649 ||| | || || |||||||| || | ||| | | || ||||| || || | | ||| Sbjct 158235 ACCCTGGCAGCAGAGACGGCAGCTTCAATGACAACTGTTCACCCTGATTATGCTGTTCTG 158176 Query 248650 GCCGGGAGGATCGCCGTCTCAAGGCTTCACAAAGAAACGAAAGAG 248694 || | ||| | | ||||||| |||||||||||||| ||| || Sbjct 158175 GCTGCCAGGCTTGAAGTCTCAAACCTTCACAAAGAAACCAAAAAG 158131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1073733092772928