Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq283 116 7e-21 >seq283 Length=477172 Score = 116 bits (128), Expect = 7e-21 Identities = 154/211 (73%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 94831 GTATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGT 94890 || ||||||||||| ||||||||||||||| | | ||||||||| || || | | Sbjct 155891 GTTTCATAAATACCATCAATGCTATCATCTGACATGGTCAGAAGGAAACAGCTTGACAAT 155950 Query 94891 TGGGGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTC 94950 || ||| || |||||| |||||||||| || || |||||||| || || | | | Sbjct 155951 TGCGGTTTGCACGTTCCAGAATTAAACAGAGTAGGCGAAGCATGAGTGAACCATTTCTCT 156010 Query 94951 GACATGAGATCATATGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGC 95009 ||||| || | ||| || |||||| | | ||||||||| |||| ||||| || || | Sbjct 156011 GACATCAGGTTATAAGTCTCAATGGCCGCTTTGATGTCATGAT-GATGAATTCCCACTGA 156069 Query 95010 CACACGCATAATCATGTCCTGAGGGCGCTCA 95040 |||||||| | ||||| || || || ||| Sbjct 156070 GACACGCATCAACATGTGTTGGGGTCGTTCA 156100 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989553304032055