Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq37 134 1e-26 >seq37 Length=1179958 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 ||||||||||| | | |||| ||||||||| || ||||| || |||||||| ||||| Sbjct 896144 CCACCTCTCAAACGAAGGACTAGATGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTC 896203 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 | | | ||||||| ||||| ||||||||| | || || || ||||||||| || Sbjct 896204 AAGGTACGGCCGTCTTCCAATTGCTTGCCAGCGAAAATTAATCGCTGTTGGTCGGGAGGG 896263 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 || ||||||||||| ||| || |||| ||| | || || | ||||| ||| || Sbjct 896264 ATACCTTCTTTGTCCTGAATCTTTGTCTTAACATTCTCGATACTGTCGCTTGGTTCAACC 896323 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || | || |||||||| ||||| || || || || || || ||||| Sbjct 896324 TCAAGAGTGATGGTTTTTCCTGTAAGCGTCTTCACGAAGATCTGCAT 896370 Score = 125 bits (138), Expect = 5e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 ||||||| |||||| || || || ||||| || ||||| ||||| || ||| | ||| Sbjct 895931 AAAACTAGATGAAGTGTCGATTCCTTTTGAATATTGTAGTCGCTCAGCGTTCGGCCATCT 895990 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || ||||| || || ||| | ||||| || || || ||| || || ||||||||||| Sbjct 895991 TCCAATTGCTTCCCGGCGAAAATCAACCGCTGCTGATCGGGCGGGATGCCTTCTTTGTCC 896050 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||| || |||| || |||| |||| ||||| ||| || || | || |||||| Sbjct 896051 TGAATCTTTGTCTTCACGTTTTCAATGGAGTCGCTTGGTTCAACTTCCAGAGTGATGGTT 896110 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || || ||||| ||||| || ||||| ||||| Sbjct 896111 TTTCCCGTCAGGGTTTTGACGAAAATCTGCAT 896142 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 15161 TGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCTAATTGT 15220 ||||||||||| ||||| || ||||| |||||||| || ||| | ||||| | ||| Sbjct 895712 TGAAGGGTGGATTCTTTCTGGATGTTATAATCGCTCAGGGTTCGGCCATCTTCGAGTTGC 895771 Query 15221 TTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAAATTTTG 15280 || || ||| | || | ||| ||||||||| ||||| ||||||||||| || || Sbjct 895772 TTTCCGGCGAAGATGAGACGCTGTTGGTCGGGAGGAATACCTTCTTTGTCTTGGATCTTT 895831 Query 15281 CTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTACCTGTC 15340 |||| || |||| || | || || || || || | || |||||||| |||||| Sbjct 895832 GTCTTCACGTTTTCAATAGAGTCACTCGGCTCGACTTCAAGCGTGATGGTTTTTCCTGTC 895891 Query 15341 AGAGTTTTTACAAAAATTTGCAT 15363 || |||||||| ||||| ||||| Sbjct 895892 AGGGTTTTTACGAAAATCTGCAT 895914 Score = 120 bits (132), Expect = 2e-22 Identities = 164/228 (72%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||| | | ||| || ||||| ||||| || ||||| |||||||| ||||| Sbjct 895459 CCACCTCTCAGGCGAAGAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCGCTC 895518 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || ||| | ||||| | |||||| || ||| | |||| | || || || ||| Sbjct 895519 AGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGATCAGGTGGG 895578 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 |||||||||||||| || || | || ||| | || |||| ||||| ||| || Sbjct 895579 ATTCCTTCTTTGTCTTGGATCTTCGTTTTCACATTCTCGATGGAGTCGCTTGGTTCAACT 895638 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTAC-AAAAATTTGCAT 15363 || | || |||||||| || ||||| ||||| || |||||| ||||| Sbjct 895639 TCGAGAGTGATGGTTTTTCCGGTCAGGGTTTTCACAAAAAATCTGCAT 895686 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 |||||||||| | | ||| || ||||| ||||| || ||||| |||||||| ||||| Sbjct 895231 CCACCTCTCAGGCGAAGAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAGTCGCTC 895290 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || ||| | ||||| | |||||| || ||| | |||| | || || || ||| Sbjct 895291 AGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGATCTGGTGGG 895350 Query 15257 ATTCCTTCTTTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACA 15316 ||||| ||||| || ||| || | || || | || |||| ||||| ||| || Sbjct 895351 ATTCCCTCTTTATCTTGAATCTTTGTTTTCACGTTCTCGATGGAGTCGCTGGGTTCCACT 895410 Query 15317 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || | |||||||||||| || |||| || || || || ||||||||| Sbjct 895411 TCCAGGGTAATGGTTTTTCCAGTCAATGTCTTGACGAAGATTTGCATA 895458 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 15152 AAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCT 15211 || || | |||||| || || || ||||| |||||||||||||| | | | | ||| Sbjct 895018 AACACAAGATGAAGAGTAGACTCCTTTTGAATGTTGTAATCGCTCAAGGTACGGCCATCT 895077 Query 15212 TCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCA 15271 || || || || || ||| | || | | || || || ||| ||||| || ||||| Sbjct 895078 TCCAACTGCTTTCCTGCGAAAATAAGCCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCT 895137 Query 15272 CAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTT 15331 ||||||| | || ||| | || |||| ||||| ||| || || | |||||||| Sbjct 895138 TGAATTTTGGTTTTCACATTCTCGATGGAGTCGCTGGGTTCCACTTCCAGCGTAATGGTC 895197 Query 15332 TTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15364 || || |||| || || || || ||||||||| Sbjct 895198 TTCCCAGTCAAGGTCTTGACGAAGATTTGCATA 895230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362168513563161