Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq4 82.4 7e-11 >seq4 Length=2104981 Score = 82.4 bits (90), Expect = 7e-11 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 13466 TCCATCGCTATTTGGAAACCATAAAAACATCTAGCCTCTGATACCTGAACTT-CGGAGTA 13524 || || || || |||||||||||||| || || ||||||| ||||| |||| | || | Sbjct 1667929 TCAATTGCAATCTGGAAACCATAAAAGCACCTTGCCTCTGGAACCTGGACTTCCTGACT- 1667871 Query 13525 AAATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGC 13578 || | ||| |||||||||| || || || || ||||| |||||||| ||||| Sbjct 1667870 GAAGCACTCTACTAAGTTTTCATTGACAATGCCATCACTTGCAGCAAAGAAAGC 1667817 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430969683460242