Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq37 152 5e-32 >seq37 Length=1179958 Score = 152 bits (168), Expect = 5e-32 Identities = 170/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || ||||| ||||||||| | || ||| | ||| | ||| | | | Sbjct 895457 ATGCAAATCTTCGTCAAGACATTGACTGGAAAAACCATTACCCTGGAAGTGGAACCCAGC 895398 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| |||||||| | || ||| ||||||| || ||||| || || || || ||||| Sbjct 895397 GACTCCATCGAGAACGTGAAAACAAAGATTCAAGATAAAGAGGGAATCCCACCAGATCAG 895338 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || |||| || ||| |||||||||||||||| ||| | | |||||||| ||| Sbjct 895337 CAGAGGCTGATTTTCGCCGGAAAACAACTCGAAGATGGCCGAACCCTGAGCGACTACAAC 895278 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||| ||||| ||| | || |||| || | || ||||| || Sbjct 895277 ATTCAAAAGGAATCCACTCTTCACTTGGTTCTTCGCCTGAGAGGTGG 895231 Score = 152 bits (168), Expect = 5e-32 Identities = 172/229 (75%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 26768 AATGCA-AGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAA 26826 |||||| | | ||||| ||||| | || |||||| | ||||| ||||| | ||| ||| Sbjct 895687 AATGCAGATTTTTTGTGAAAACCCTGACCGGAAAAACCATCACTCTCGAAGTTGAACCAA 895628 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 |||| |||||||| | || ||| ||||| ||||||||||| || || || |||| Sbjct 895627 GCGACTCCATCGAGAATGTGAAAACGAAGATCCAAGACAAAGAAGGAATCCCACCTGATC 895568 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 | || || || |||| || ||| |||||||||||||||| ||| | | |||||||| | Sbjct 895567 AGCAGAGGCTGATTTTCGCCGGAAAACAACTCGAAGATGGCCGAACCCTGAGCGACTACA 895508 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||| ||||| ||| | || |||| || | || ||||| || Sbjct 895507 ACATTCAAAAGGAATCCACTCTTCACTTGGTTCTTCGCCTGAGAGGTGG 895459 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || |||||||| | || |||||| | ||||| | ||| | || | | Sbjct 895914 ATGCAGATTTTCGTAAAAACCCTGACAGGAAAAACCATCACGCTTGAAGTCGAGCCGAGT 895855 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| | || || | || || |||||| ||||||||||| || |||||||| ||| Sbjct 895854 GACTCTATTGAAAACGTGAAGACAAAGATCCAAGACAAAGAAGGTATTCCTCCCGACCAA 895795 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | ||||| | || ||| || ||||||||||||| ||| | | ||||| |||||| Sbjct 895794 CAGCGTCTCATCTTCGCCGGAAAGCAACTCGAAGATGGCCGAACCCTGAGCGATTATAAC 895735 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || |||||||| || | || ||||| || | ||| | || |||| Sbjct 895734 ATCCAGAAAGAATCCACCCTTCACCTGGTGTTGCGTCTTCGTGGTGGAA 895686 Score = 111 bits (122), Expect = 2e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 ||||| | || || || || | || |||||| | ||||| | || | ||| ||| | Sbjct 896370 ATGCAGATCTTCGTGAAGACGCTTACAGGAAAAACCATCACTCTTGAGGTTGAACCAAGC 896311 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 |||| |||||| | || || ||||||| ||||||||||| || |||||||| ||| Sbjct 896310 GACAGTATCGAGAATGTTAAGACAAAGATTCAGGACAAAGAAGGTATCCCTCCCGACCAA 896251 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || | |||| || ||||| ||| | ||||| | | | | | |||||||| ||| Sbjct 896250 CAGCGATTAATTTTCGCTGGCAAGCAATTGGAAGACGGCCGTACCTTGAGCGACTACAAC 896191 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAA 26997 || || ||||| || || | ||||| ||||| | | ||||| |||| Sbjct 896190 ATCCAGAAAGAGTCGACCCTTCATCTAGTCCTTCGTTTGAGAGGTGGAA 896142 Score = 109 bits (120), Expect = 5e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 26768 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAA 26827 |||||| | || || ||||| | || |||||| | ||||| | ||| | ||| ||| Sbjct 896143 AATGCAGATTTTCGTCAAAACCCTGACGGGAAAAACCATCACTCTGGAAGTTGAACCAAG 896084 Query 26828 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCA 26887 |||| |||| || | || || ||||||| ||||||||||| || || |||||||| Sbjct 896083 CGACTCCATTGAAAACGTGAAGACAAAGATTCAGGACAAAGAAGGCATCCCGCCCGATCA 896024 Query 26888 ACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAA 26947 || | | |||| || ||| || ||| | ||||||| ||| | |||||||| || Sbjct 896023 GCAGCGGTTGATTTTCGCCGGGAAGCAATTGGAAGATGGCCGAACGCTGAGCGACTACAA 895964 Query 26948 CATTCAAAAAGAATCTACTATCCATCTGGT 26977 |||||||| ||||| || | ||||| || Sbjct 895963 TATTCAAAAGGAATCGACACTTCATCTAGT 895934 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || || || || || ||||| || | || || | ||| | ||| | | | Sbjct 895229 ATGCAAATCTTCGTCAAGACCTTGACTGGGAAGACCATTACGCTGGAAGTGGAACCCAGC 895170 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||| |||||||| | || ||| || ||| ||||| || || || || || ||||| Sbjct 895169 GACTCCATCGAGAATGTGAAAACCAAAATTCAAGACAAGGAGGGAATCCCACCAGATCAG 895110 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || || || |||| || || || || | ||||||| | | | | ||||| || ||| Sbjct 895109 CAGAGGCTTATTTTCGCAGGAAAGCAGTTGGAAGATGGCCGTACCTTGAGCGATTACAAC 895050 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGT 26977 |||||||| || |||||| | ||||| || Sbjct 895049 ATTCAAAAGGAGTCTACTCTTCATCTTGT 895021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478647914479120