Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq283 86.0 2e-11 >seq283 Length=477172 Score = 86.0 bits (94), Expect = 2e-11 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 364967 TTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTC-CATGCGAACTCTC 365025 ||||||| ||||| || || | ||||| || || |||||||| || || || ||||| Sbjct 150206 TTCCAGATGATCTTAAACCACTGTACAAGACAGTTTGGGAAATCTCACAAAAGA-CTCTC 150148 Query 365026 ATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATTC 365085 || |||||||| || || | || || ||||| ||||||||||| || || || ||| Sbjct 150147 ATAGATATGGCTGCTGACAGAGGAGCCTTTATTGACCAGAGCCAGTCCTTCAATGTTTTC 150088 Query 365086 ATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAA 365139 | |||| || | | ||| || ||| |||||| ||||| || |||||| Sbjct 150087 TTTGCTCAACCTGACAACCACAAACTGACAAGCATGCACTTCTATGGCTGGAAA 150034 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303313171193222