Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq37 111 1e-19 >seq37 Length=1179958 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || ||||||||||||||| | ||| ||| ||||| Sbjct 895457 ATGCAAATCTTCGTCAAGACATTGACTGGAAAAACCATTACCCTGGAAGTGGAACCCAGC 895398 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||| | | | | || ||| ||| ||| |||||||| || |||| |||||| Sbjct 895397 GACTCCATCGAGAACGTGAAAACAAAGATTCAAGATAAAGAGGGAATCCCACCAGATCAG 895338 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || || |||| || || |||||| | ||||||| | |||| || ||| || ||| Sbjct 895337 CAGAGGCTGATTTTCGCCGGAAAACAACTCGAAGATGGCCGAACCCTGAGCGACTACAAC 895278 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||||| || || ||| | || |||| Sbjct 895277 ATTCAAAAGGAATCCACTCTTCACTTGGT 895249 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 |||||||| || ||||| || | || || || |||||||| | ||| ||| ||||| Sbjct 895229 ATGCAAATCTTCGTCAAGACCTTGACTGGGAAGACCATTACGCTGGAAGTGGAACCCAGC 895170 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||| | | | | || ||| |||||| || || || || |||| |||||| Sbjct 895169 GACTCCATCGAGAATGTGAAAACCAAAATTCAAGACAAGGAGGGAATCCCACCAGATCAG 895110 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || || ||||||| || || || || || ||||||| | ||| || |||||| ||| Sbjct 895109 CAGAGGCTTATTTTCGCAGGAAAGCAGTTGGAAGATGGCCGTACCTTGAGCGATTACAAC 895050 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGA 115513 |||||||| ||||||||| | ||| | |||||| | |||| || ||| Sbjct 895049 ATTCAAAAGGAGTCTACTCTTCATCTTGTGTTGCGTCTGCGCGGTGGA 895002 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAG 115344 |||||| ||||| |||||||| || |||||||||||||| || | ||| || | || Sbjct 896143 AATGCAGATTTTCGTCAAAACCCTGACGGGAAAAACCATCACTCTGGAAGTTGAACCAAG 896084 Query 115345 CGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 |||| | ||| | | || || ||| ||| || ||||||||| |||| ||||| Sbjct 896083 CGACTCCATTGAAAACGTGAAGACAAAGATTCAGGACAAAGAAGGCATCCCGCCCGATCA 896024 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | | |||| || || || ||||| ||||||| | ||| || ||| || || Sbjct 896023 GCAGCGGTTGATTTTCGCCGGGAAGCAATTGGAAGATGGCCGAACGCTGAGCGACTACAA 895964 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||| || || || | ||| | || ||| | || || || || Sbjct 895963 TATTCAAAAGGAATCGACACTTCATCTAGTTTTGCGTTTACGTGGCGG 895916 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 115285 AATGCAAATTTTT-GTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343 |||||| |||||| || ||||| || || ||||||||||| || ||||| || | | Sbjct 895687 AATGCAGATTTTTTGTGAAAACCCTGACCGGAAAAACCATCACTCTCGAAGTTGAACCAA 895628 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||||| | | | | || ||| || || || |||||||| |||| ||||| Sbjct 895627 GCGACTCCATCGAGAATGTGAAAACGAAGATCCAAGACAAAGAAGGAATCCCACCTGATC 895568 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| || || |||| || || |||||| | ||||||| | |||| || ||| || | Sbjct 895567 AGCAGAGGCTGATTTTCGCCGGAAAACAACTCGAAGATGGCCGAACCCTGAGCGACTACA 895508 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||||||| || || ||| | || |||| Sbjct 895507 ACATTCAAAAGGAATCCACTCTTCACTTGGT 895477 Score = 84.2 bits (92), Expect = 2e-11 Identities = 156/229 (68%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| || ||||| || || ||||||||||| || | ||| ||| | || Sbjct 895914 ATGCAGATTTTCGTAAAAACCCTGACAGGAAAAACCATCACGCTTGAAGTCGAGCCGAGT 895855 Query 115346 GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCAG 115405 ||| || ||| | | || || ||| || || |||||||| | || || || Sbjct 895854 GACTCTATTGAAAACGTGAAGACAAAGATCCAAGACAAAGAAGGTATTCCTCCCGACCAA 895795 Query 115406 CAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAAC 115465 || | || || | || || || ||| | ||||||| | |||| || |||||||||| Sbjct 895794 CAGCGTCTCATCTTCGCCGGAAAGCAACTCGAAGATGGCCGAACCCTGAGCGATTATAAC 895735 Query 115466 ATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAA 115514 || || ||||| || || | || |||||||| | | || || |||| Sbjct 895734 ATCCAGAAAGAATCCACCCTTCACCTGGTGTTGCGTCTTCGTGGTGGAA 895686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425331449826520