Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 7e-12 >seq4 Length=2104981 Score = 86.0 bits (94), Expect = 7e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 93406 CTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGA 93465 ||| |||||||| ||||| || || || || || || || | | ||| ||||| ||| Sbjct 1667930 CTCAATTGCAATCTGGAAACCATAAAAGCACCTTGCCTCTGGAACCTGGACTTCCTGACT 1667871 Query 93466 AAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATAT 93525 || | |||||| | ||||||||||| || ||||| ||| ||||| |||||||| | Sbjct 1667870 GAAGCACTCTACTAAGTTTTCATTGACAATGCCATCACTTGCAGCAAAGAAAGCCAAGAC 1667811 Query 93526 ATGCTTTATAAAATGTTTCTCATCATC 93552 |||| || || | | |||||| ||| Sbjct 1667810 ATGCGAGATGAAGTATCTCTCATTATC 1667784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556843948000040