Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq37 89.7 4e-13 >seq37 Length=1179958 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | || ||||| || || |||||||||||| ||||| |||| || Sbjct 895457 ATGCAAATCTTCGTCAAGACATTGACTGGAAAAACCATTACCCTGGAAGTGGAACCCAGC 895398 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || | | | | | || ||| ||| ||||||||||| | || | | || Sbjct 895397 GACTCCATCGAGAACGTGAAAACAAAGATTCAAGATAAAGAGGGAATCCCACCAGATCAG 895338 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 ||||| || || || || || |||||||| |||||| ||| || ||| ||||| Sbjct 895337 CAGAGGCTGATTTTCGCCGGAAAACAACTCGAAGATGGCCGAACCCTGAGCGACTACAAC 895278 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGT 22042 ||||| |||||||| |||||||| |||| Sbjct 895277 ATTCAAAAGGAATCCACTCTTCACTTGGT 895249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358114233192034