Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq293 82.4 9e-11 >seq293 Length=468840 Score = 82.4 bits (90), Expect = 9e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 176819 TTCCCGCGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAGAGACCAGCAACT 176878 || || || || || ||||| || || ||||| ||||||||| | ||| || Sbjct 431227 TTGCCACGAAGTGGAAACACTCCATAATGATCCTTGCCAACCACACTCAAGCCACTGACA 431286 Query 176879 GCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCC 176938 || | |||||| || ||||| ||||| |||| |||||| ||||||| | || | ||| Sbjct 431287 GCCAAGGTCTTGGCTGAATCTCCCTCTGTCAGGATGAGAGTACACTGACTTGAGT-TGCG 431345 Query 176939 GTCCCC-GCCTTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTTTG 176986 | |||| || | || ||||| || | |||||||||||| ||||||| Sbjct 431346 GCCCCCAGCATCATTGGCATCATCAAGTTTGGGAATACCACGAATTTTG 431394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613488633738360