Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq37 98.7 7e-16 >seq37 Length=1179958 Score = 98.7 bits (108), Expect = 7e-16 Identities = 165/235 (70%), Gaps = 14/235 (6%) Strand=Plus/Plus Query 39492 GCCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGC 39551 |||||| || ||||||| || | ||| | || ||| ||||| ||||| || ||| Sbjct 895915 GCCGCCACGTAAACGCAAAACTAGATGAAGTGTCGATTCCTTTTGAATATTGTAGTCGCT 895974 Query 39552 CAAAACGCGTTC----ATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCG 39607 || |||||| ||| |||||||| |||||| | ||||| || ||||||||||| | Sbjct 895975 CA----GCGTTCGGCCATCTTCCAATTGCTTCCCGGCGAAAATCAACCGCTGCTGATCGG 896030 Query 39608 AGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCT-- 39665 || | |||||||||||| | | | ||||| | ||| | | || |||| Sbjct 896031 GCGGGATGCCTTCTTTGTC-CTGAATCTTTGTCTTCACGT--TTTCAATGGAGTCGCTTG 896087 Query 39666 -TTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||| || |||| ||| || ||||| ||||| | ||||| ||||| |||||||| Sbjct 896088 GTTCAACTTCCAGAGTGATGGTTTTTCCCGTCAGGGTTTTGACGAAAATCTGCAT 896142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347359350534293