Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq283 95.1 2e-14 seq293 86.0 8e-12 >seq283 Length=477172 Score = 95.1 bits (104), Expect = 2e-14 Identities = 76/92 (83%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 112896 AACAGTCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAAT 112955 |||||||| ||| | ||||||||||||||||| ||||| ||||| || | || |||||| Sbjct 150862 AACAGTCTGTTGGTTGCACCAATGCCAACAGCATCCACTGCACAGATTCTTGGAAATAAT 150803 Query 112956 GAATGCTTTGAACCCTACACGACGAACATCTA 112987 || | ||||||||| ||||| | |||||||| Sbjct 150802 GAGTCCTTTGAACCTTACACAAGTAACATCTA 150771 >seq293 Length=468840 Score = 86.0 bits (94), Expect = 8e-12 Identities = 142/202 (70%), Gaps = 5/202 (2%) Strand=Plus/Plus Query 176888 GAGGCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGATCGCGA 176947 || ||||| || || ||| | || |||||||| || || || || || ||||| Sbjct 431203 GAAGCATCTCGCACGTTCAGAAGTTTGCCACGAAGTGGAAACACTCCATAATGATCCTTG 431262 Query 176948 CCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTCACGATG 177007 ||||||||| | || || || | || || || ||||| |||||||||| |||| Sbjct 431263 CCAACCACACTCAAGCCACTGACAGCCAAGGTCTTGGCTGAATCTCCCTCTGTCAGGATG 431322 Query 177008 AGTGTACACTTGCCAGATTGTGCCGTACCC-GCCTTGTTCGCATCATCCAATTTGGGAAT 177066 || ||||||| | || | ||| | ||| || | || |||||||| | ||||||||| Sbjct 431323 AGAGTACACTGACTTGAGT-TGCGGCCCCCAGCATCATTGGCATCATCAAGTTTGGGAAT 431381 Query 177067 ACCAGTAATTTTG---GACTTT 177085 |||| ||||||| |||||| Sbjct 431382 ACCACGAATTTTGCTTGACTTT 431403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620723614783120