Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq37 123 4e-23 >seq37 Length=1179958 Score = 123 bits (136), Expect = 4e-23 Identities = 171/238 (72%), Gaps = 1/238 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||||||||||| ||||| |||| || | || | || || ||| || Sbjct 895450 ATTTGCATACCACCTCTCAGGCGAAGAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTG 895509 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||| | |||| ||| || | |||||||||||| ||||| | ||||| ||| Sbjct 895510 TAGTCGCTCAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGA 895569 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 ||||| || ||||||||||| ||||| || || ||||| | ||| || | ||| Sbjct 895570 TCAGGTGGGATTCCTTCTTTGTCTTGGATCTTCGTTTTCACATTCTCGATGGAGTCGCTT 895629 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTAC-AAATATTTGCATT 193361 | |||||||| ||||| || ||||| || || || ||||| || ||| || |||||| Sbjct 895630 GGTTCAACTTCGAGAGTGATGGTTTTTCCGGTCAGGGTTTTCACAAAAAATCTGCATT 895687 Score = 118 bits (130), Expect = 2e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||||||||| ||||| || ||||| | || | |||||| || || |||||| Sbjct 896141 ATTCCACCTCTCAAACGAAGGACTAGATGAAGGGTCGACTCTTTCTGGATGTTGTAGTCG 896200 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 || || | || || ||||| || || || |||||||||| |||||| || ||| Sbjct 896201 CTCAAGGTACGGCCGTCTTCCAATTGCTTGCCAGCGAAAATTAATCGCTGTTGGTCGGGA 896260 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| || || || || || || | ||| ||| | ||| | ||| Sbjct 896261 GGGATACCTTCTTTGTCCTGAATCTTTGTCTTAACATTCTCGATACTGTCGCTTGGTTCA 896320 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || ||||| ||||| ||||| || || || || ||||| Sbjct 896321 ACCTCAAGAGTGATGGTTTTTCCTGTAAGCGTCTTCACGAAGATCTGCAT 896370 Score = 102 bits (112), Expect = 1e-16 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||||||||||| ||||| |||| || | || | || || ||| || Sbjct 895222 ATTTGCATACCACCTCTCAGGCGAAGAACCAAGTGAAGAGTGGATTCCTTTTGAATGTTG 895281 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 |||||| | |||| ||| || | |||||||||||| ||||| | ||||| ||| Sbjct 895282 TAGTCGCTCAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGA 895341 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || ||||| ||||||||||| || || ||||| | || || | ||| Sbjct 895342 TCTGGTGGGATTCCCTCTTTATCTTGAATCTTTGTTTTCACGTTCTCGATGGAGTCGCTG 895401 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| || || || ||||| || || | || || || || |||||||| Sbjct 895402 GGTTCCACTTCCAGGGTAATGGTTTTTCCAGTCAATGTCTTGACGAAGATTTGCAT 895457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899627174208720