Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq37 107 4e-18 >seq37 Length=1179958 Score = 107 bits (118), Expect = 4e-18 Identities = 166/233 (71%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 ||||||||||| || || | || || || | ||| | || ||| || || || || || Sbjct 895456 ATACCACCTCTCAGGCGAAGAACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAGTC 895514 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 | ||||| |||| || | |||||| || || || || | ||||| |||||||| Sbjct 895515 GCTCAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGATCAGG 895574 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| ||||||||||| ||||| || || |||| ||||| || || || | ||| Sbjct 895575 TGGGATTCCTTCTTTGTCTTGGATCTTCGTTTTCACATTCTCGATGGAGTCGCTTGGTTC 895634 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTT-AATAAATATCTGCATT 192537 ||||| ||||| |||||||| || || | ||||| | ||| ||||||||| Sbjct 895635 AACTTCGAGAGTGATGGTTTTTCCGGTCAGGGTTTTCACAAAAAATCTGCATT 895687 Score = 104 bits (114), Expect = 5e-17 Identities = 163/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATC 192365 ||||||||||| || || | || || || | ||| | || ||| || || || || || Sbjct 895228 ATACCACCTCTCAGGCGAAGAACCAAGTGAAGAGTGGATTCCTTTTGA-ATGTTGTAGTC 895286 Query 192366 AGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGG 192425 | ||||| |||| || | |||||| || || || || | ||||| ||||| || Sbjct 895287 GCTCAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAAATCAGCCTCTGCTGATCTGG 895346 Query 192426 TGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTC 192485 ||| ||||| ||||||||||| || || |||| || || || || || | ||| Sbjct 895347 TGGGATTCCCTCTTTATCTTGAATCTTTGTTTTCACGTTCTCGATGGAGTCGCTGGGTTC 895406 Query 192486 TACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || ||||||||||| ||||| ||||| || | || || ||||| Sbjct 895407 CACTTCCAGGGTAATGGTTTTTCCAGTCAATGTCTTGACGAAGATTTGCAT 895457 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984449462353350