Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Acropora_20digitifera_20[refseq_20GCF_5F000222465.1_202016-01-15] 2,421 sequences; 447,497,157 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq498 84.2 6e-11 >seq498 Length=301909 Score = 84.2 bits (92), Expect = 6e-11 Identities = 147/214 (69%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 ||||||||||||||||| ||||| || || | ||| |||| ||| | ||| || ||| Sbjct 45513 CCAACAGCATCAATTTCATCAATAAATATAATACAAGGAGCATTCTTTCTTGCTTGGGCA 45572 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | || || || | | || |||| ||||| ||||||| | ||||| || | Sbjct 45573 AAAAGATCCCTAACTCTTGCTGGACCAACGCCAACGAACATTTCCAGGAATTCTGATCCT 45632 Query 289150 GATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTA 289209 || | || ||||| || ||||||| || ||||| || | || || || || || Sbjct 45633 GAGATGCTAAGGAATGGAACCCTTGCTTCCCCAGCTACAGCTTTGGCAAGCAGAGTTTTT 45692 Query 289210 CCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCT 289243 || || ||||| || || ||| | | |||||| Sbjct 45693 CCAGTACCAGGAGGGCCTGATAAAATAGCTCCCT 45726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471771945597877